Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20polyzona_20[genbank_20GCA_5F001939255.1_202017-01-09] 5,321 sequences; 36,629,716 total letters Query= NC_023848.1 Length=163023 Score E Sequences producing significant alignments: (Bits) Value seq125 95.1 1e-14 >seq125 Length=315652 Score = 95.1 bits (104), Expect = 1e-14 Identities = 116/156 (74%), Gaps = 2/156 (1%) Strand=Plus/Plus Query 21743 CGCATACCCGAAATAGGCGACAAGTTCTGTTC-CGGCATGGCCCAGAAAGGCACCTGCGG 21801 || |||||| | || |||||||||||| ||| || || || ||||| || ||| ||| Sbjct 28838 CGTATACCCCAGATCGGCGACAAGTTCGCTTCTCGTCACGG-TCAGAAGGGTACCATCGG 28896 Query 21802 GATGATCTATTCGCAAGAAAACATGCCATTCACATCTTCCGGCATGACCCCCGACATCAT 21861 || | ||| || || ||||||| ||||| | ||||| || ||||||||||| Sbjct 28897 TATCACCTACCGCCAGGAGGACATGCCGTTCACCGCAGAGGGCATCACGCCCGACATCAT 28956 Query 21862 CATCAACCCCAACTGCATTCCCTCCAGAATGACCAT 21897 |||||||||| || |||||| ||| | |||||||| Sbjct 28957 CATCAACCCCCACGCCATTCCGTCCCGTATGACCAT 28992 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521510910698280