Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20polyzona_20[genbank_20GCA_5F001939255.1_202017-01-09] 5,321 sequences; 36,629,716 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq4755 143 3e-29 seq633 143 3e-29 seq4520 131 2e-25 seq145 120 3e-22 seq3662 113 4e-20 seq905 82.4 7e-11 >seq4755 Length=85889 Score = 143 bits (158), Expect = 3e-29 Identities = 378/570 (66%), Gaps = 8/570 (1%) Strand=Plus/Plus Query 148327 ACTCGTTGTTGCCCAAAATCTGCGCGGTCGTTGCCGTGGGCATGTACGCTACCAGCAGCG 148386 |||||||||| ||||| ||||| ||| | || || ||||| ||| | || |||| Sbjct 30547 ACTCGTTGTTACCCAAGATCTGGCTGGTAGAGGCAGTTGGCATCGGCGCGAGTAGAAGCG 30606 Query 148387 AGTTGCGCAAACCGCGATTTTTTATTTTGCGCTTCAGAGCCGCCCAGTCCCAGAGCGGCG 148446 |||| || | ||| | | | | || |||||| || ||||||||| || || Sbjct 30607 AGTTCCGAAGCCCGTGCTGTGCAACCTTCGCCTTCAGGCTCGTCCAGTCCCAAAGATCCG 30666 Query 148447 ACGGTGTCACGTTCCACATGTCGTACTGCAGAATGCCGCGGCTAGCGGGGCTGCCCTCGT 148506 || ||||| ||| | ||||||||| || |||| | ||| |||||||| | || Sbjct 30667 TAGGCGTCACCCCCCAGAGGTCGTACTGGAGCTTGCCCTCGGAAGCAGGGCTGCCTTGGT 30726 Query 148507 ACGAGCTGTACGGTCCGTGCGCCGCCGCCAGTTCGCAGCTCGCCTCGAGCGCGCCGTAGT 148566 ||| || | ||| | | ||||| || ||||| ||||||| ||| ||| || Sbjct 30727 ACGTCTCATAGGTGCCGAACTGCTGCGCCATCTCACAGCTGGCCTCGACGGCGGCGTGGT 30786 Query 148567 AAATCGTCTCGGCAATTTGCCTGTTGAGCA-GCGCCGCCGACTCGCTTTCGTACGGCATA 148625 | || ||||| || ||| ||| ||| |||| ||| | ||| | ||||| Sbjct 30787 AGATGGTCTCAAAGATCTGCAGGTTCAGCTTGCGC-GCCTCAGGGGAGTCGAAGGGCATG 30845 Query 148626 CGCAGCCGCACAAACGCGTCGGCAAGGCCCTGTACGCCCACGCCAATGGGCCGGTGTTTA 148685 || || || || |||||||| || ||||| || || | || ||||| ||||| Sbjct 30846 CGGAGGGCCATGAAGGCGTCGGCCAGACCCTGCACACCGATACCGATGGGACGGTGGCGC 30905 Query 148686 ATGTTGGAGAGGCGCGCGCTCTCG-AGCGGATAGTGGTTGCGGTCGATGATCTTGTCAAG 148744 ||||| || | | ||| ||| | | |||||||| |||| ||||||||| || || Sbjct 30906 ATGTTTGAACGCCTCGC-CTCGGGGATCGGATAGTAGTTGACGTCGATGATGCGGTTCAG 30964 Query 148745 ATTGCGCACCACCACCTTTGTAATTCTGCGCAGCAATTCAAAATCGTACTTGTCATCTAC 148804 ||| | | |||||||| || | | ||||| | || | |||||| | | | Sbjct 30965 GTTGAACGCGACCACCTTCGTCACGTCGTGCAGCTTCTGGAAGTTGTACTTCCCGTTCTC 31024 Query 148805 GATGCAT--CGGTTCACGGCGATAGAGGCTAGATTGCACACGGCCGTCTCATCCGGGGCG 148862 |||| | ||| | || || ||||| || ||||| || ||||||||||| |||| Sbjct 31025 GATGAAGGACGGGAGA--GCAATGGAGGCCAGGTTGCAGACAGCCGTCTCATCGGGGGAA 31082 Query 148863 CTGTACTCTACGATCTCGGCGCACAGATTG 148892 |||||| |||||||| | |||||| ||| Sbjct 31083 GAGTACTCGACGATCTCCGTGCACAGGTTG 31112 Score = 89.7 bits (98), Expect = 5e-13 Identities = 187/276 (68%), Gaps = 2/276 (1%) Strand=Plus/Plus Query 149406 TTGTGCACGTTGACGCCGATGCCGCC-GCCGTACTTTGAGATGGCCGCGCAGTCGCCGAG 149464 ||||| | ||||| || |||||||| ||||| ||| ||| || ||||| || Sbjct 31782 TTGTGGATGTTGATACCAATGCCGCCAGCCGT-CTTACTGATCATGGCACAGTCCTTCAG 31840 Query 149465 CGTCGAGTAGATGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACAT 149524 |||||||||||| ||||||||| ||| |||||| | || || ||||| |||| | Sbjct 31841 CGTCGAGTAGATACCCTCGATGGAGTCATCCTTCATCGACACGAGGAAGCAAGAGCTGAG 31900 Query 149525 TTGCGGAAAACGCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTTCTG 149584 || || | |||||||| ||||| || || || || || || || || Sbjct 31901 CTGGGGGTTGGGAGTGCCGGCGTTGAACAGTGTAGGTGACGCATGGGTGAAGTAACGCTC 31960 Query 149585 GCTCATCATCTCGTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCCTATGGC 149644 | ||| | | ||| | ||||| | |||| || ||||| || |||||||| | || Sbjct 31961 GGACATGAGGTTGTAGGTCTCGATCGCGCGCTCGATGTCGGATCCGTGGATGCCGACAGC 32020 Query 149645 GACGCGCATCAGCATATGCTGCGGTCGCTCCGCCAC 149680 ||| ||||| |||| || || || ||||| || || Sbjct 32021 GACACGCATGAGCAAGTGTTGAGGACGCTCGGCAAC 32056 >seq633 Length=42484 Score = 143 bits (158), Expect = 3e-29 Identities = 151/199 (76%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522 ||| ||||| ||||| || |||||||| | ||| | |||||| |||||||| || Sbjct 35171 GGTAGACTCCTTCTGAATGTTGTAATCCGAGAGGGTGCGCCCGTCCTCAAGCTGCTTCCC 35230 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | ||||| |||||||||||||||||||||||||||||||| |||||| ||| Sbjct 35231 GGCGAAGATGAGACGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGGATCTTGGCCTT 35290 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | || || | || ||| || |||| |||| ||| |||||||| || || Sbjct 35291 GACGTTGTCGATGGTATCCGAGGACTCGACCTCGAGCGTGATGGTCTTGCCGGTGAGGGT 35350 Query 133643 TTTTACGAAAATCTGCATG 133661 || ||||| ||||||||| Sbjct 35351 CTTCACGAAGATCTGCATG 35369 Score = 129 bits (142), Expect = 6e-25 Identities = 148/199 (74%), Gaps = 0/199 (0%) Strand=Plus/Plus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522 |||| ||| ||||| || ||||| || || |||| |||||| ||||||||||| Sbjct 34555 GGTGCTCTCCTTCTGGATGTTGTAGTCCGACAGCGTGCGGCCGTCCTCAAGCTGCTTGCC 34614 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | ||||||||||||||||| |||||||| || |||||||| |||||| ||| Sbjct 34615 GGCGAAGATGAGCCGCTGCTGGTCAGGAGGGATACCCTCCTTGTCCTGGATCTTCGCCTT 34674 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | |||| |||||| | || ||| || || | |||| || ||||| || || || Sbjct 34675 CACGTTATCAATCGTGTCCGAGGACTCAACCTCCAACGTGATCGTCTTGCCCGTGAGCGT 34734 Query 133643 TTTTACGAAAATCTGCATG 133661 || ||||| ||||||||| Sbjct 34735 CTTGACGAAGATCTGCATG 34753 Score = 114 bits (126), Expect = 1e-20 Identities = 150/205 (73%), Gaps = 2/205 (1%) Strand=Plus/Plus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | |||| ||| ||||| || ||||||||| | ||| | | | ||||| | || Sbjct 34885 ATGGAGGGTGCTCTCCTTCTGGATGTTGTAATCGGAGAGGGTGCGGCCA-TCCTCCAACT 34943 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCT 133575 |||||||||| | || || ||||||||||| ||||| || || |||||||| ||||| Sbjct 34944 GCTTGCCCGCAAAGATCAGGCGCTGCTGGTCCGGAGGAATACCCTCCTTGTCTTGGATCT 35003 Query 133576 TTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGG 133635 | ||||| | || | ||||||| | ||| || |||| |||| ||| ||||||| Sbjct 35004 TCGCCTTGACGTTGTCGATAGTGTCGGACGACTCGACCTCGAGAGTGATGGTCTTGCCGG 35063 Query 133636 TCAGAGTTTTTACGAAAATCTGCAT 133660 ||| || || || || |||||||| Sbjct 35064 TCAAGGTCTTGACAAAGATCTGCAT 35088 >seq4520 Length=427429 Score = 131 bits (144), Expect = 2e-25 Identities = 150/199 (75%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| || || || |||||||| | ||| ||| | ||||| | ||||||||| Sbjct 158187 GTCGACTCCTTTTGGATGTTGTAATCCGAAAGAGTGCGACCA-TCCTCCAACTGCTTGCC 158129 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || || ||||| |||||||| ||||| || |||||||| ||||||| ||| Sbjct 158128 GGCGAAGATAAGACGCTGTTGGTCGGGCGGGATACCCTCCTTGTCTTGGATCTTTGCCTT 158069 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 || | || | |||||||| | ||| || |||| ||||| ||| ||||| |||| || Sbjct 158068 GACGTTGTCGATCGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTGCCAGTCAACGT 158009 Query 133643 TTTTACGAAAATCTGCATG 133661 || ||||||||||||||| Sbjct 158008 CTTGACGAAAATCTGCATG 157990 Score = 107 bits (118), Expect = 2e-18 Identities = 145/200 (73%), Gaps = 4/200 (2%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGT--GGACGAGTCCTCGAGCTGCTTG 133520 ||| ||||| ||||| || ||||||||| || ||| || || ||||| ||||||||| Sbjct 157906 GGTAGACTCCTTCTGAATGTTGTAATCGGACAACGTCCGGCCG--TCCTCAAGCTGCTTG 157849 Query 133521 CCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC 133580 || || | || | ||||||||||| || || || || |||||||| |||||| | Sbjct 157848 CCGGCAAAGATCAAGCGCTGCTGGTCCGGGGGAATCCCCTCCTTGTCCTGAATCTTTGCC 157789 Query 133581 TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGA 133640 |||| | || | || |||| | ||| || || | ||||| || |||||||||| Sbjct 157788 TTGACGTTGTCGATGGTATCGGACGACTCGACCTCAAGGGTGATCGTCTTGCCGGTCAAC 157729 Query 133641 GTTTTTACGAAAATCTGCAT 133660 || || ||||| || ||||| Sbjct 157728 GTCTTCACGAAGATTTGCAT 157709 Score = 104 bits (114), Expect = 2e-17 Identities = 116/155 (75%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 133506 TCCTCGAGCTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTG 133565 ||||||||||||||||| || | ||||| || |||||||||||||||||||| |||||| Sbjct 157635 TCCTCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCGGGAGGGATGCCCTCCTTG 157576 Query 133566 TCGGTGATCTTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACG 133625 || |||||| ||| | | || | ||||| | | ||| || |||| |||| Sbjct 157575 TCCTGGATCTTCGCCTTCACATTGTCGATGGTGTCTGAAGACTCGACCTCGAGCGTGATC 157516 Query 133626 GTTTTGCCGGTCAGAGTTTTTACGAAAATCTGCAT 133660 || ||||| || || || || || || |||||||| Sbjct 157515 GTCTTGCCCGTGAGGGTCTTGACAAAGATCTGCAT 157481 Score = 100 bits (110), Expect = 3e-16 Identities = 143/199 (72%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || ||||| || | |||| ||| |||||| | |||||| || Sbjct 158415 GTAGACTCCTTCTGGATGTTGTAGTCAGAGAGCGTGCGACC-GTCCTCCAACTGCTTTCC 158357 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || ||||||||||| || || || ||||| ||||| || |||||| ||| Sbjct 158356 AGCGAAGATAAGCCGCTGCTGATCCGGGGGAATGCCCTCCTTATCCTGGATCTTCGCCTT 158297 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | || | |||||| | || ||| || || | |||| || || || || || || Sbjct 158296 CACGTTGTCGATCGTGTCTGAGGACTCAACCTCTAGCGTGATCGTCTTCCCTGTGAGCGT 158237 Query 133643 TTTTACGAAAATCTGCATG 133661 || ||||||||||||||| Sbjct 158236 CTTGACGAAAATCTGCATG 158218 >seq145 Length=336 Score = 120 bits (132), Expect = 3e-22 Identities = 147/199 (74%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGA--GTCCTCGAGCTGCTTGC 133521 || ||||| ||||| || |||||||| | | | | ||| |||||| |||||||||| Sbjct 84 GTCGACTCCTTCTGGATGTTGTAATC--CGAGAGGGTACGGCCGTCCTCAAGCTGCTTGC 141 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| | ||||| |||||||||||||| || ||||| |||||||| |||||| || Sbjct 142 CAGCGAAGATGAGGCGCTGCTGGTCGGGCGGAATGCCCTCCTTGTCCTGGATCTTCGCCT 201 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | || | |||||| | | ||| || |||| |||| || || || |||| | Sbjct 202 TGACATTGTCGATCGTGTCCGACGACTCGACCTCGAGAGTGATCGTCTTCCCCGTCAAGG 261 Query 133642 TTTTTACGAAAATCTGCAT 133660 | || ||||| |||||||| Sbjct 262 TCTTGACGAAGATCTGCAT 280 >seq3662 Length=107388 Score = 113 bits (124), Expect = 4e-20 Identities = 124/165 (75%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 120640 AGGCACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTC 120699 ||||| |||||||| ||||||| |||||||| || || ||||| || ||| ||| || Sbjct 75612 AGGCATGCAAAGTCGGTGTGCATACCCTCGTCTCGTGAGATCAGTTCATTGGAAAAGGTG 75671 Query 120700 AGGCCGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAG 120759 ||||||||||| | ||| | |||||| ||||||||||||| || || |||||| Sbjct 75672 AGGCCGGGCATCAAGCCACGCTTCTTGAGCCAGAATATGGCGGCGAACGACCCGGAAAAG 75731 Query 120760 AACACGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAAC 120804 || | ||||||||| ||| || || || | ||||| || ||| Sbjct 75732 AAGATGCCCTCCACAGCGGCGAACGCTACAAGACGCTCTGCGAAC 75776 Score = 107 bits (118), Expect = 2e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 120640 AGGCACGCAAAGTCCGTGTGCAGGCCCTCGTCGCGCGATATCAGCTCGTTGCTAAACGTC 120699 ||||| || ||||| ||||||| |||||| || || ||||| ||||||||| || ||| Sbjct 78159 AGGCAGGCGAAGTCGGTGTGCATGCCCTCATCACGAGATATGAGCTCGTTGGAGAAGGTC 78100 Query 120700 AGGCCGGGCATGATGCCTTTCGTCTTGATGTAGAATATGGCGGCAAAGCTGCCCGAAAAG 120759 ||||||||||| | ||| | |||| | |||| || | ||| ||| ||| || ||| Sbjct 78099 AGGCCGGGCATCAAGCCACGCTTCTTCAACCAGAAGATAGAGGCGAAGGAGCCAGAGAAG 78040 Query 120760 AACACGCCCTCCACGATGGCAAAGGCGACCATGCGCTCGGCCAACGTCGCCGTCTTGCTG 120819 || | ||||| ||| || ||||| || | ||||| || |||| | | |||| | Sbjct 78039 AAGATACCCTCGACGGCAGCGAAGGCAACGAGACGCTCAGCAAACGCAGACTCCTTGTCG 77980 Query 120820 TCGATCCACTTCATGGCCCACTCGGCCTTTTT 120851 |||||| | | ||||| || ||||| || Sbjct 77979 GAGATCCAGTGAAGAGCCCAGTCCGCCTTCTT 77948 >seq905 Length=41247 Score = 82.4 bits (90), Expect = 7e-11 Identities = 75/95 (79%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522 ||||||||| ||||| || ||||| |||| | ||| |||||||||||||||||| Sbjct 19010 GGTGGACTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGGCCGTCCTCGAGCTGCTTGCC 18951 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGC 133557 |||| | || || |||||||| || || ||||||| Sbjct 18950 CGCGAAGATCAGGCGCTGCTGATCAGGGGGGATGC 18916 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483388646474040