Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20polyzona_20[genbank_20GCA_5F001939255.1_202017-01-09] 5,321 sequences; 36,629,716 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq3662 87.8 4e-12 >seq3662 Length=107388 Score = 87.8 bits (96), Expect = 4e-12 Identities = 107/146 (73%), Gaps = 0/146 (0%) Strand=Plus/Minus Query 131861 CTTGTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCAGGTGCTTTCTGTGCTATCTTT 131920 |||||||| || || ||| || || || |||||||| || | ||| || || || Sbjct 75763 CTTGTAGCGTTCGCCGCTGTGGAGGGCATCTTCTTTTCCGGGTCGTTCGCCGCCATATTC 75704 Query 131921 TGGCTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTGTCCAATCAATTCATCTCGAGA 131980 ||||| ||||||||||| |||||||| || ||| | || |||||| || | ||||| || Sbjct 75703 TGGCTCAAGAAGCGTGGCTTGATGCCCGGCCTCACCTTTTCCAATGAACTGATCTCACGA 75644 Query 131981 GATGAAGCATTGCATACTGAATTTGC 132006 || || | |||| || || ||||| Sbjct 75643 GACGAGGGTATGCACACCGACTTTGC 75618 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186731888666481