Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20polyzona_20[genbank_20GCA_5F001939255.1_202017-01-09] 5,321 sequences; 36,629,716 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq633 107 1e-18 seq4520 96.9 2e-15 >seq633 Length=42484 Score = 107 bits (118), Expect = 1e-18 Identities = 149/206 (72%), Gaps = 2/206 (1%) Strand=Plus/Plus Query 33546 ATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTG 33605 ||| || |||||||| || || ||||||||||||||||| ||||| | || ||||| || Sbjct 34885 ATGGAGGGTGCTCTCCTTCTGGATGTTGTAATCGGAGAGGGTGCGGCCATCCTCCAACTG 34944 Query 33606 TTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTT 33665 || || ||||| |||| |||||||| || | || | ||| || ||||| || || Sbjct 34945 CTTGCCCGCAAAGATCAGGCGCTGCTGGTCCGGAGGAATACCCTCCTTGTCTTGGATCTT 35004 Query 33666 CTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTG 33724 | | | || | ||| | |||||| || || || || | ||||| || || || | Sbjct 35005 C-GCCTTGACGTTGTCGATAGTGTCGGACGACTCGACCTCGAGAGTGATGGTCTTGCCGG 35063 Query 33725 TTAACGTTTTTACAAAGATCTGCATA 33750 | || || || ||||||||||||||| Sbjct 35064 TCAAGGTCTTGACAAAGATCTGCATA 35089 Score = 82.4 bits (90), Expect = 5e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || || |||||||| || || |||||||| || || || ||||| |||| || | || Sbjct 34550 TGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGACAGCGTGCGGCCGTCCTCAAGCTGC 34609 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666 || ||||| || || | |||||||| || | || | ||| || ||||| || ||| Sbjct 34610 TTGCCGGCGAAGATGAGCCGCTGCTGGTCAGGAGGGATACCCTCCTTGTCCTGGATCTTC 34669 Query 33667 TGTTTCAACATAGTCACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTT 33726 |||| || | ||||| || || || || | ||||||||| || || || Sbjct 34670 GCCTTCACGTTATCAATCGTGTCCGAGGACTCAACCTCCAACGTGATCGTCTTGCCCGTG 34729 Query 33727 AACGTTTTTACAAAGATCTGCAT 33749 | ||| || || ||||||||||| Sbjct 34730 AGCGTCTTGACGAAGATCTGCAT 34752 >seq4520 Length=427429 Score = 96.9 bits (106), Expect = 2e-15 Identities = 161/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | | ||| | || | ||| ||||| ||| ||||| |||||||| ||||| Sbjct 157708 ACCACCACGGAGACGCAGGACAAGATGAAGAGTCGACTCCTTTTGGATGTTGTAGTCGGA 157649 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||| || || | || || | || || |||||||| || | ||| ||||| || | || Sbjct 157648 GAGGGTACGGCCATCCTCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCGGGAGG 157589 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | || || ||||| || ||| |||| ||| ||| | |||||| || || | Sbjct 157588 GATGCCCTCCTTGTCCTGGATCTTCGCCTTCA-CATTGTCGATGGTGTCTGAAGACTCGA 157530 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | || | ||||||||| || || || | || || ||||||||||||||| Sbjct 157529 CCTCGAGCGTGATCGTCTTGCCCGTGAGGGTCTTGACAAAGATCTGCATA 157480 Score = 91.5 bits (100), Expect = 1e-13 Identities = 138/194 (71%), Gaps = 2/194 (1%) Strand=Plus/Minus Query 33558 CTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAA 33617 ||| || || |||||||||||||| | || || |||| || | || || |||||||| Sbjct 157900 CTCCTTCTGAATGTTGTAATCGGACAACGTCCGGCCGTCCTCAAGCTGCTTGCCGGCAAA 157841 Query 33618 AATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACAT 33677 ||||| |||||||| || | || | || || ||||| ||| || || | || | Sbjct 157840 GATCAAGCGCTGCTGGTCCGGGGGAATCCCCTCCTTGTCCTGAATCTT-TGCCTTGACGT 157782 Query 33678 AGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTA 33736 ||| | ||| ||| || || || |||| |||||||| || || || ||||| || | Sbjct 157781 TGTCGATGGTATCGGACGACTCGACCTCAAGGGTGATCGTCTTGCCGGTCAACGTCTTCA 157722 Query 33737 CAAAGATCTGCATA 33750 | ||||| |||||| Sbjct 157721 CGAAGATTTGCATA 157708 Score = 86.0 bits (94), Expect = 4e-12 Identities = 143/204 (70%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || ||||| ||| ||||| ||||||||||| || || ||||| | || ||||| || Sbjct 158193 TGAAGAGTCGACTCCTTTTGGATGTTGTAATCCGAAAGAGTGCGACCATCCTCCAACTGC 158134 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666 || ||||| || || | |||||| || || |||| | ||| || ||||| || || Sbjct 158133 TTGCCGGCGAAGATAAGACGCTGTTGGTCGGGCGGGATACCCTCCTTGTCTTGGATCTT- 158075 Query 33667 TGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725 || | || | ||| | |||||| || || || || | ||||| || || || || Sbjct 158074 TGCCTTGACGTTGTCGATCGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTGCCAGT 158015 Query 33726 TAACGTTTTTACAAAGATCTGCAT 33749 ||||| || || || |||||||| Sbjct 158014 CAACGTCTTGACGAAAATCTGCAT 157991 Score = 84.2 bits (92), Expect = 1e-11 Identities = 136/193 (70%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 33558 CTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAA 33617 ||| || || |||||||| || ||||| ||||| |||| ||||| || ||||| || || Sbjct 158410 CTCCTTCTGGATGTTGTAGTCAGAGAGCGTGCGACCGTCCTCCAACTGCTTTCCAGCGAA 158351 Query 33618 AATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACAT 33677 || | ||||||||||| | || | || || || || || ||| ||| || | Sbjct 158350 GATAAGCCGCTGCTGATCCGGGGGAATGCCCTCCTTATCCTGGATCTTCGCCTTC-ACGT 158292 Query 33678 AGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTA 33736 ||| | ||||| || || || || | ||||||||| || ||||| | ||| || | Sbjct 158291 TGTCGATCGTGTCTGAGGACTCAACCTCTAGCGTGATCGTCTTCCCTGTGAGCGTCTTGA 158232 Query 33737 CAAAGATCTGCAT 33749 | || |||||||| Sbjct 158231 CGAAAATCTGCAT 158219 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328682683648320