Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20polyzona_20[genbank_20GCA_5F001939255.1_202017-01-09] 5,321 sequences; 36,629,716 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq4520 111 4e-19 >seq4520 Length=427429 Score = 111 bits (122), Expect = 4e-19 Identities = 148/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| ||| | || || || || ||||| | || || || ||| ||| Sbjct 157994 CAGATTTTCGTCAAGACGTTGACTGGCAAGACCATCACCCTCGAGGTTGAGTCTTCCGAC 158053 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| |||||| ||||| || || || || ||| ||| || Sbjct 158054 ACGATCGACAACGTCAAGGCAAAGATCCAAGACAAGGAGGGTATCCCGCCCGACCAACAG 158113 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | |||||||||||||| ||||||||||| ||||| | ||| | | ||||||||| || Sbjct 158114 CGTCTTATCTTCGCCGGCAAGCAGTTGGAGGATGGTCGCACTCTTTCGGATTACAACATC 158173 Query 206353 CAGAAAGAGTCTACTCTTCACCTTGT 206378 || || ||||| ||||||||||| || Sbjct 158174 CAAAAGGAGTCGACTCTTCACCTCGT 158199 Score = 104 bits (114), Expect = 6e-17 Identities = 146/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232 ||||| || ||| ||||||||||| || |||||||| | || || || || ||| Sbjct 158222 CAGATTTTCGTCAAGACGCTCACAGGGAAGACGATCACGCTAGAGGTTGAGTCCTCAGAC 158281 Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292 || |||| || ||| ||||| || || || || || ||| ||||| || Sbjct 158282 ACGATCGACAACGTGAAGGCGAAGATCCAGGATAAGGAGGGCATTCCCCCGGATCAGCAG 158341 Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352 | ||||||||||| |||||||||||||| || || | || | | || |||||| || Sbjct 158342 CGGCTTATCTTCGCTGGAAAGCAGTTGGAGGACGGTCGCACGCTCTCTGACTACAACATC 158401 Query 206353 CAGAAAGAGTCTACTCTTCACCTTG 206377 ||||| |||||||| || ||||||| Sbjct 158402 CAGAAGGAGTCTACGCTCCACCTTG 158426 Score = 93.3 bits (102), Expect = 1e-13 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 || ||| | || || || |||||||| | || || || || || || |||| Sbjct 157724 AAGACGTTGACCGGCAAGACGATCACCCTTGAGGTCGAGTCGTCCGATACCATCGACAAC 157783 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||||||||| || || || || ||| |||||| || | | ||||| Sbjct 157784 GTCAAGGCAAAGATTCAGGACAAGGAGGGGATTCCCCCGGACCAGCAGCGCTTGATCTTT 157843 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 ||||| |||||| | || || || |||| ||| ||||||||||| | ||||| |||||| Sbjct 157844 GCCGGCAAGCAGCTTGAGGACGGCCGGACGTTGTCCGATTACAACATTCAGAAGGAGTCT 157903 Query 206365 ACTCTTCACCT 206375 || |||||||| Sbjct 157904 ACCCTTCACCT 157914 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181740228997641