Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20polyzona_20[genbank_20GCA_5F001939255.1_202017-01-09] 5,321 sequences; 36,629,716 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq4520 84.2 2e-11 >seq4520 Length=427429 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| ||||| |||||||||||| | |||||| ||| |||||||| || |||| | Sbjct 157674 GACTCCTTTTGGATGTTGTAGTCGGAGAGGGTACGGCCATCCTCGAGCTGCTTGCCGGCA 157615 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| ||||| || || || ||||| ||||| || || || || || |||| Sbjct 157614 AAGATGAGACGTTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTCACA 157555 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || || | | ||| || |||| ||| | ||| || || || || || || Sbjct 157554 TTGTCGATGGTGTCTGAAGACTCGACCTCGAGCGTGATCGTCTTGCCCGTGAGGGTCTTG 157495 Query 132110 ATGAAAATCTGCAT 132123 | || |||||||| Sbjct 157494 ACAAAGATCTGCAT 157481 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476579499397560