Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20polyzona_20[genbank_20GCA_5F001939255.1_202017-01-09] 5,321 sequences; 36,629,716 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq3662 89.7 5e-13 >seq3662 Length=107388 Score = 89.7 bits (98), Expect = 5e-13 Identities = 126/177 (71%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 110712 GCTCGATGATATTATTGTTCACGATGACGTCGGCGGCAGCGAAAAAGGCGAGAACGTGTT 110771 |||||| || || | ||| ||||| | |||| ||||| || || ||||||||||| Sbjct 77777 GCTCGACGAGGTTCTCGTTGACGATACCATCGGACGCAGCAAAGAACGCGAGAACGTGCG 77718 Query 110772 TAAGAAAGAATCGTTCCTTGTCGTTCAGTTTATTGTTCCAGTCTTCAAAGTCCTTGGACA 110831 | ||| ||||| | ||||||||| ||||||||||| | | ||||||||||| Sbjct 77717 AGATGAAGTGACGTTCGTCGTCGTTCAGGCGGTTGTTCCAGTCGTGGAGGTCCTTGGACA 77658 Query 110832 TGTCGATCTCTTCGACCTTCCAGTGACAATCGACCGCCTTCTTGTACGATTGCCAAA 110888 ||| ||||| || || ||||| | | | |||||||||||| ||||||| Sbjct 77657 GGTCCATCTCCTCAGCCGTCCAGAAGGACGCCTCAGCCTTCTTGTACATCTGCCAAA 77601 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445064795658720