Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20polyzona_20[genbank_20GCA_5F001939255.1_202017-01-09] 5,321 sequences; 36,629,716 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq5274 98.7 1e-15 >seq5274 Length=138102 Score = 98.7 bits (108), Expect = 1e-15 Identities = 163/232 (70%), Gaps = 10/232 (4%) Strand=Plus/Plus Query 147232 AGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCAGTCCACGTACCTGGCCCCAAAG 147291 ||||| || ||||| | ||| ||||| | | || | | ||||| ||||| ||| Sbjct 115014 AGCTGATCGACGCCTTTGCCAGTGTAGTCCGCATCACAATTCTCGTACTGCGCCCCGAAG 115073 Query 147292 TGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTG--CGAGAAGC 147349 |||| |||||||||||| || || || || ||||| || || ||| ||||| Sbjct 115074 TGCCGCCACTGGAAGCCATAAACGGGACCGAGGTCACCCTCGCGTCGGTGTCCGAGA--- 115130 Query 147350 CCGCCCGCTTG---AGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACTCCCTTGG 147406 |||| ||||| || || || ||| || | | |||||||||| || ||||| Sbjct 115131 CCGC--GCTTGGCGAGGAATTCTTTGGAGCCATTGCCGTCCCAGATCTTGACGCCCTTCA 115188 Query 147407 CGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTCCTC 147458 ||||||||| ||| ||||| ||| |||| |||||||||||| ||||| || Sbjct 115189 CGGAGAGCTGCTTTGAGTCTGTGCAGCCGTTGATGAACCAGAGGAGCTCTTC 115240 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583449190754400