Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20polyzona_20[genbank_20GCA_5F001939255.1_202017-01-09] 5,321 sequences; 36,629,716 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq3662 230 3e-54 seq3992 86.0 9e-11 >seq3662 Length=107388 Score = 230 bits (254), Expect = 3e-54 Identities = 361/508 (71%), Gaps = 14/508 (3%) Strand=Plus/Plus Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834 ||| ||| | |||||| || ||||| ||||| ||||| ||||| || |||||| | |||| Sbjct 77599 GATTTGGCAGATGTAC-AAGAAGGCTGAGGCGTCCTTCTGGACGGCTGAGGAGATGGACC 77657 Query 1455835 TCGGCGCCGACACGGTCCACTGGGTGT--CGC-TGAGCGACGACGAGCGCCATTTCATCA 1455891 | | ||| | ||||| ||| ||| ||||||||| || || |||||| Sbjct 77658 TGTCCAAGGACCTCCACGACTGGAACAACCGCCTGAACGACGACGAACGTCACTTCATCT 77717 Query 1455892 AGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGC 1455951 |||||| ||||| || ||| || || |||||| ||||| ||||||||| | || Sbjct 77718 CGCACGTTCTCGCGTTCTTT-GCTGCGTCCGATGGTATCGTCAACGAGAACCTCGTCGAG 77776 Query 1455952 CGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCC 1456011 || || ||| |||||||| | | ||||| |||| || ||||| ||||||||| Sbjct 77777 CGGTTCTCGAATGAGGTCCAGGCGGCCGAGGCTCGTTGCTTCTACGGCTTCCAGATCATG 77836 Query 1456012 ATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCCG 1456071 || || ||||||||||| || || || || || || |||||||| ||| ||||||| || Sbjct 77837 ATGGAGAACATCCACTCCGAGACTTATTCCCTTCTCATCGACACATACATCAAGGATCCT 77896 Query 1456072 GTCGAGAAGGACCACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGGCC 1456131 | || || |||||||| ||||||||| || | || | | | ||| ||||| Sbjct 77897 CGCCAGCGCGAGCACCTCTTCGACGCCATCGATACCATTCCCTGTATCAAGAAGAAGGCG 77956 Query 1456132 GACTGGGCGATGAAGTGGAT---CAACAAGGAGGGCCTCGACACTTTGCCGAGCGGCTCG 1456188 |||||||| | | ||||| | |||||||| || | ||||| ||||| |||| Sbjct 77957 GACTGGGCTCTTCACTGGATCTCCGACAAGGAG----TCTGC-GTTTGCTGAGCGTCTCG 78011 Query 1456189 TCGGCTTTGCCG-CGTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTGGC 1456247 | | ||| || | ||||||||| ||||| ||||| ||| ||| | | ||||| ||| Sbjct 78012 TTGCCTTCGCTGCCGTCGAGGGTATCTTCTTCTCTGGCTCCTTCGCCTCTATCTTCTGGT 78071 Query 1456248 TCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275 | |||||||| ||| | |||||||| || Sbjct 78072 TGAAGAAGCGTGGCTTGATGCCCGGCCT 78099 Score = 196 bits (216), Expect = 7e-44 Identities = 376/544 (69%), Gaps = 13/544 (2%) Strand=Plus/Minus Query 1455772 GCGGATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCG 1455831 || ||||||| | |||||| ||||| || | || ||||| ||||| | || ||| | | Sbjct 76175 GCAGATATGGCAGATGTAC-AAAAATGCTCAAGCGTCCTTCTGGACGGTAGAAGAGATAG 76117 Query 1455832 ACCTCGGCGC-CGACACGGTCCACTGGGTGTCGC----TGAGCGACGACGAGCGCCATTT 1455886 ||||| ||| |||| | |||||| ||| | | | | |||| || || || Sbjct 76116 ACCTCT-CGCACGACCTCATGGACTGGGAC-CGCAAGTTAAATGCCAACGAACGGCACTT 76059 Query 1455887 CATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGG 1455946 |||| |||| || ||||| || ||||||| || ||||||||| ||||||||| | Sbjct 76058 CATCTCCTACGTGCTAGCCTTCTT-CGCCGCCTCAGACGGCATCGTGAACGAGAACCTCG 76000 Query 1455947 CCGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGA 1456006 | || || || ||||||||| ||||||| || | || ||||| ||||||| Sbjct 75999 TTGAGCGGTTCTCTAACGAGGTCCAAGCCGCAGAGGCCCGCTGCTTCTACGGCTTCCAGA 75940 Query 1456007 TCGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGG 1456066 || ||||| ||| | || || || || ||||| ||||| |||||||| ||| |||| | Sbjct 75939 TCATGATCGAGAACGTGCATTCGGAGACGTACTCCCTCCTCATCGACACGTACATCAAAG 75880 Query 1456067 ACCCGGTCGAGAAGGACCACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAA 1456126 |||| ||| | |||||| |||||||||||| ||||||| | | ||| | Sbjct 75879 ACCCCACTGAGCGCGCGTTCCTCTTCGACGCCATCGACACCGTGCCGTGCATCAAGAAGA 75820 Query 1456127 AGGCCGACTGGGCGATGAAGTGGATCAACAAGGAGGGCCTCGACACTTTGCCGAGCGGCT 1456186 |||| |||||||| | |||||| | || || || || || ||||| || Sbjct 75819 AGGCGGACTGGGCCCTCCGCTGGATCGCGGACGAACGCTCCGTG--TTCGCAGAGCGTCT 75762 Query 1456187 CGTCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCTTTTG 1456245 || | || ||||| || ||||||||||| || || || ||| |||||| || || Sbjct 75761 TGTAGCGTTCGCCGCTGTGGAGGGCATCTTCTTTTCCGGGTCGTTCGCCGCCATATTCTG 75702 Query 1456246 GCTCAAGAAGCGCGGCCTCATGCCCGGTCTTCTGCTTTAGCAACGAATTTATCAGTCGCG 1456305 |||||||||||| ||| | |||||||| | || |||| ||| ||| | ||| || | Sbjct 75701 GCTCAAGAAGCGTGGCTTGATGCCCGG-CCTCACCTTTTCCAATGAACTGATCTCACGAG 75643 Query 1456306 ACGA 1456309 |||| Sbjct 75642 ACGA 75639 Score = 129 bits (142), Expect = 8e-24 Identities = 157/207 (76%), Gaps = 8/207 (4%) Strand=Plus/Plus Query 1456571 CTGCCGGTGGCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTG 1456630 || || || | |||||| || |||||||||| ||||||| |||| ||||| || ||| | Sbjct 78308 CTCCCTGTTGGGCTCATTGGTATGAACGCCAA-GCTCATGCGCCAATACATCGAGTTT-G 78365 Query 1456631 TCGCCGACCGCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACG--GCCAACC 1456688 | || || || || |||| ||| |||||| ||| ||||||||||| ||| | |||| Sbjct 78366 TGGCGGATCGTCTCCTCGTGGCCCTCGGCGGCG-AGAAGCACTAC--AACGTCACGAACC 78422 Query 1456689 CGTTCCCATGGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCG 1456748 | ||| | ||||| ||||||||||| |||||||||| ||||| || ||| |||| Sbjct 78423 CCTTCGACTTCATGGACATGATCTCGCTCCAGGGCAAGACGAACTTCTTTGAGAAGCGCG 78482 Query 1456749 TG-GCGAGTACGCCAAGGCCGGCGTCA 1456774 || ||| ||| | |||||||| |||| Sbjct 78483 TGTCCGACTACTCGAAGGCCGGTGTCA 78509 Score = 96.9 bits (106), Expect = 5e-14 Identities = 145/199 (73%), Gaps = 8/199 (4%) Strand=Plus/Minus Query 1456574 CCGGTGGCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCG 1456633 ||||| ||||||||||||||||||||| || |||||||| ||||| || || |||| Sbjct 75423 CCGGTCTCGCTCATCGGCATGAACGCCAGA-CTGATGTGCCAATACATCGAGTTC-GTCG 75366 Query 1456634 CCGACCGCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCC--AACCCGT 1456691 | ||||| | |||| |||| || || | ||||||||| ||| | || || | Sbjct 75365 CAGACCGGTTACTCGTCTCGCTGGGGAACGAA-AAGCACTACA--ACGTCACGAATCCCT 75309 Query 1456692 TCCCATGGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGTG- 1456750 || | ||||| ||||||||||| |||||||| ||||| |||||| || ||| Sbjct 75308 TCGACTTCATGGACATGATCTCGCTCACCGGCAAGACGAACTTCTTCGAGAAGCGGGTGT 75249 Query 1456751 GCGAGTACGCCAAGGCCGG 1456769 ||||||||| |||||| Sbjct 75248 CCGAGTACGCTCTGGCCGG 75230 >seq3992 Length=40521 Score = 86.0 bits (94), Expect = 9e-11 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 725068 CGCGCGAGATCCAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCCAGGCACGCCG 725127 ||||||||||||||||||||||||| |||||| | | || || || || | ||||||| Sbjct 38340 CGCGCGAGATCCAGACCGCCGTGCGGCTGATCCTCCCTGGTGAGCTCGCGAAGCACGCCA 38399 Query 725128 TCTCCGAGGGCACCA 725142 ||||||||||||||| Sbjct 38400 TCTCCGAGGGCACCA 38414 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177297979770002