Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20polyzona_20[genbank_20GCA_5F001939255.1_202017-01-09] 5,321 sequences; 36,629,716 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq4520 138 1e-27 seq633 134 1e-26 seq145 122 8e-23 >seq4520 Length=427429 Score = 138 bits (152), Expect = 1e-27 Identities = 148/193 (77%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| |||||||||||||||| ||| || || |||| || |||||||| || ||||| Sbjct 157900 CTCCTTCTGAATGTTGTAATCGGACAACGTCCGGCCGTCCTCAAGCTGCTTGCCGGCAAA 157841 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||||| ||||||||||||| |||| | |||||||||| |||||| ||| | || Sbjct 157840 GATCAAGCGCTGCTGGTCCGGGGGAATCCCCTCCTTGTCCTGAATCTTTGCCTTGA-CGT 157782 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | || ||| ||| || ||||| | |||||||| || || ||||| || |||| Sbjct 157781 TGTCGATGGTATCGGACGACTCGACCTCAAGGGTGATCGTCTTGCCGGTCAACGTCTTCA 157722 Query 35724 CAAATATCTGCAT 35736 | || || ||||| Sbjct 157721 CGAAGATTTGCAT 157709 Score = 93.3 bits (102), Expect = 4e-14 Identities = 138/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||||||||| ||||||||||| | | || || | || |||| |||||| || || || Sbjct 158182 CTCCTTTTGGATGTTGTAATCCGAAAGAGTGCGACCATCCTCCAACTGCTTGCCGGCGAA 158123 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||| ||||| | || | | ||||||||| ||||||| ||| | || Sbjct 158122 GATAAGACGCTGTTGGTCGGGCGGGATACCCTCCTTGTCTTGGATCTTTGCCTTGA-CGT 158064 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | ||||||| || || ||||| | ||||| || || || ||||| || || | Sbjct 158063 TGTCGATCGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTTGCCAGTCAACGTCTTGA 158004 Query 35724 CAAATATCTGCAT 35736 | || |||||||| Sbjct 158003 CGAAAATCTGCAT 157991 >seq633 Length=42484 Score = 134 bits (148), Expect = 1e-26 Identities = 150/198 (76%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 35540 GTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCC 35599 || |||||||| || ||||||||||||| | ||| || | || |||| |||||| ||| Sbjct 34892 GTGCTCTCCTTCTGGATGTTGTAATCGGAGAGGGTGCGGCCATCCTCCAACTGCTTGCCC 34951 Query 35600 GCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTC 35659 ||||| |||| ||||||||||||| ||||| | ||||||||| |||||| ||| Sbjct 34952 GCAAAGATCAGGCGCTGCTGGTCCGGAGGAATACCCTCCTTGTCTTGGATCTTCGCCTTG 35011 Query 35660 AGAGTTG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGT 35718 | |||| | | |||||| ||| || ||||| | ||||| || || || ||||| || Sbjct 35012 A-CGTTGTCGATAGTGTCGGACGACTCGACCTCGAGAGTGATGGTCTTGCCGGTCAAGGT 35070 Query 35719 TTTCACAAATATCTGCAT 35736 || ||||| |||||||| Sbjct 35071 CTTGACAAAGATCTGCAT 35088 Score = 116 bits (128), Expect = 3e-21 Identities = 144/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 35540 GTACTCTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCC 35599 || |||||||| || |||||||| || | || || || |||| || |||||||| || Sbjct 34556 GTGCTCTCCTTCTGGATGTTGTAGTCCGACAGCGTGCGGCCGTCCTCAAGCTGCTTGCCG 34615 Query 35600 GCAAATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTC 35659 || || || | |||||||||||| | ||| | | |||||||||| |||||| |||| Sbjct 34616 GCGAAGATGAGCCGCTGCTGGTCAGGAGGGATACCCTCCTTGTCCTGGATCTTCGCCTTC 34675 Query 35660 AGAGTTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTT 35719 | | | | |||||| || || ||||||| ||||||||| || ||||| | || Sbjct 34676 ACGTTATCAATCGTGTCCGAGGACTCAACCTCCAACGTGATCGTCTTGCCCGTGAGCGTC 34735 Query 35720 TTCACAAATATCTGCAT 35736 || || || |||||||| Sbjct 34736 TTGACGAAGATCTGCAT 34752 Score = 109 bits (120), Expect = 5e-19 Identities = 145/199 (73%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| |||||||||||||| | | ||| ||| |||| || |||||||| || || || Sbjct 35177 CTCCTTCTGAATGTTGTAATCCGAGAGGGTGCGCCCGTCCTCAAGCTGCTTCCCGGCGAA 35236 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | ||| | || ||||||||| |||||| ||| | || Sbjct 35237 GATGAGACGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTGA-CGT 35295 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | || || || || ||||| | |||||| || || || || | || |||| Sbjct 35296 TGTCGATGGTATCCGAGGACTCGACCTCGAGCGTGATGGTCTTGCCGGTGAGGGTCTTCA 35355 Query 35724 CAAATATCTGCATTCTGTG 35742 | || |||||||| ||||| Sbjct 35356 CGAAGATCTGCATGCTGTG 35374 >seq145 Length=336 Score = 122 bits (134), Expect = 8e-23 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || ||||||||||| | | ||| || |||| || |||||||| || || || Sbjct 89 CTCCTTCTGGATGTTGTAATCCGAGAGGGTACGGCCGTCCTCAAGCTGCTTGCCAGCGAA 148 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | |||| || |||||||||| |||||| ||| | | | Sbjct 149 GATGAGGCGCTGCTGGTCGGGCGGAATGCCCTCCTTGTCCTGGATCTTCGCCTTGACATT 208 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||| ||| || ||||| | |||||||| || |||||||| || || || Sbjct 209 GTCGATCGTGTCCGACGACTCGACCTCGAGAGTGATCGTCTTCCCCGTCAAGGTCTTGAC 268 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 269 GAAGATCTGCAT 280 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450763616590680