Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20polyzona_20[genbank_20GCA_5F001939255.1_202017-01-09] 5,321 sequences; 36,629,716 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq4520 127 2e-24 seq633 109 6e-19 seq2370 96.9 4e-15 seq905 91.5 1e-13 >seq4520 Length=427429 Score = 127 bits (140), Expect = 2e-24 Identities = 155/209 (74%), Gaps = 2/209 (1%) Strand=Plus/Minus Query 134506 CGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTC-GCCAACGGTGTGAGAGTCGTCG 134564 ||||||| || || || ||||| ||||||||||| || | |||| || | ||| || Sbjct 157916 CGAGGTGAAGGGTAGACTCCTTCTGAATGTTGTAATCGGACAAC-GTCCGGCCGTCCTCA 157858 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGA 134624 ||||| ||||| ||||| ||||| |||||||| || || || || || || || || ||| Sbjct 157857 AGCTGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGGGGGAATCCCCTCCTTGTCCTGA 157798 Query 134625 ATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTA 134684 || ||| ||||| ||| | || |||||||| || || || || || || || || Sbjct 157797 ATCTTTGCCTTGACGTTGTCGATGGTATCGGACGACTCGACCTCAAGGGTGATCGTCTTG 157738 Query 134685 CCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || || || ||||| |||||||| Sbjct 157737 CCGGTCAACGTCTTCACGAAGATTTGCAT 157709 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || | ||| |||| || || || || || || |||||||| |||||||||||| Sbjct 157707 CCACCACGGAGACGCAGGACAAGATGAAGAGTCGACTCCTTTTGGATGTTGTAGTCGGAG 157648 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | ||| | || |||||||| ||||| ||||| || | ||| ||||| ||||| || Sbjct 157647 AGGGTACGGCCATCCTCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCGGGAGGG 157588 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || || || || || || || ||| | ||||| || || || || Sbjct 157587 ATGCCCTCCTTGTCCTGGATCTTCGCCTTCACATTGTCGATGGTGTCTGAAGACTCGACC 157528 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 ||||| || || || || || || | || || || || || ||||| Sbjct 157527 TCGAGCGTGATCGTCTTGCCCGTGAGGGTCTTGACAAAGATCTGCAT 157481 Score = 87.8 bits (96), Expect = 2e-12 Identities = 143/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 134508 AGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGAGC 134567 ||||| ||||| || ||||| || ||||||||||| | ||| || ||| || | | Sbjct 158424 AGGTGGAGCGTAGACTCCTTCTGGATGTTGTAGTCAGAGAGCGTGCGACCGTCCTCCAAC 158365 Query 134568 TGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAATT 134627 || || || || || || | ||||||||||| || || ||||| || || || || || Sbjct 158364 TGCTTTCCAGCGAAGATAAGCCGCTGCTGATCCGGGGGAATGCCCTCCTTATCCTGGATC 158305 Query 134628 TTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTACCG 134687 || || || ||| | ||||| || || || || || || || || || || || Sbjct 158304 TTCGCCTTCACGTTGTCGATCGTGTCTGAGGACTCAACCTCTAGCGTGATCGTCTTCCCT 158245 Query 134688 GTTAAAGTTTTAACGAAAATTTGCAT 134713 || | || || |||||||| ||||| Sbjct 158244 GTGAGCGTCTTGACGAAAATCTGCAT 158219 >seq633 Length=42484 Score = 109 bits (120), Expect = 6e-19 Identities = 149/208 (72%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 134506 CGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGA 134565 |||| || || ||| ||||| || |||||||| ||| | |||| | || || | Sbjct 34881 CGAGATGGAGGGTGCTCTCCTTCTGGATGTTGTAATCGGAGAGGGTGCGGCCATCCTCCA 34940 Query 134566 GCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAA 134625 ||| ||||| ||||| |||| |||||||| || || || || || || || ||||| | Sbjct 34941 ACTGCTTGCCCGCAAAGATCAGGCGCTGCTGGTCCGGAGGAATACCCTCCTTGTCTTGGA 35000 Query 134626 TTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTAC 134685 | || ||||| ||| | ||||||||||| || || |||||||| ||||| || | Sbjct 35001 TCTTCGCCTTGACGTTGTCGATAGTGTCGGACGACTCGACCTCGAGAGTGATGGTCTTGC 35060 Query 134686 CGGTTAAAGTTTTAACGAAAATTTGCAT 134713 |||| || || || || || || ||||| Sbjct 35061 CGGTCAAGGTCTTGACAAAGATCTGCAT 35088 Score = 109 bits (120), Expect = 6e-19 Identities = 149/208 (72%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 134506 CGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCGA 134565 ||||||| || || || ||||| ||||||||||| || | |||| | ||| || | Sbjct 35161 CGAGGTGCAGGGTAGACTCCTTCTGAATGTTGTAATCCGAGAGGGTGCGCCCGTCCTCAA 35220 Query 134566 GCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGCCTTCTTTTTCTTGAA 134625 |||| || || || || || | ||||||||| ||||| || |||||||| || || || | Sbjct 35221 GCTGCTTCCCGGCGAAGATGAGACGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGGA 35280 Query 134626 TTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACGTCGAGAGTAATGGTTTTAC 134685 | || ||||| ||| | || || || || || || ||||| || ||||| || | Sbjct 35281 TCTTGGCCTTGACGTTGTCGATGGTATCCGAGGACTCGACCTCGAGCGTGATGGTCTTGC 35340 Query 134686 CGGTTAAAGTTTTAACGAAAATTTGCAT 134713 |||| | || || ||||| || ||||| Sbjct 35341 CGGTGAGGGTCTTCACGAAGATCTGCAT 35368 >seq2370 Length=61181 Score = 96.9 bits (106), Expect = 4e-15 Identities = 85/106 (80%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 134505 ACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGAGAGTCGTCG 134564 || ||||| || ||||| ||||| || ||||||||||||| || |||| | ||| || Sbjct 54690 ACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTAAGGGTGCGGCCGTCCTCA 54631 Query 134565 AGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGC 134610 ||||| ||||| ||||| |||| ||||||||| ||||| || |||| Sbjct 54630 AGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCGGGGGGGATGC 54585 >seq905 Length=41247 Score = 91.5 bits (100), Expect = 1e-13 Identities = 89/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 134496 AGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCAACGGTGTGA 134555 || || | ||| ||||| || ||||| ||||| || ||||||||||||| | |||| | Sbjct 19030 AGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGG 18971 Query 134556 GAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGTATGC 134610 ||| |||||||| ||||| || || |||| ||||||||||| || || |||| Sbjct 18970 CCGTCCTCGAGCTGCTTGCCCGCGAAGATCAGGCGCTGCTGATCAGGGGGGATGC 18916 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505364784688920