Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20polyzona_20[genbank_20GCA_5F001939255.1_202017-01-09] 5,321 sequences; 36,629,716 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq633 86.0 5e-12 >seq633 Length=42484 Score = 86.0 bits (94), Expect = 5e-12 Identities = 141/202 (70%), Gaps = 1/202 (0%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 ||||| || || ||||| ||||| || | | ||||| |||| || ||||| || ||| Sbjct 35172 GTAGACTCCTTCTGAATGTTGTAATCCGAGAGGGTGCGCCCGTCCTCAAGCTGCTTCCCG 35231 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | ||||||||||| || || || || | || || || || ||||||| || Sbjct 35232 GCGAAGATGAGACGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTG 35291 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | | || | || || | || || || || || || || | ||||| || || || Sbjct 35292 ACGTTGTCGATGGTATCCGAGGACTCGACCTCGAGCGTGATGGTCTTGCCGGTGAGGGTC 35351 Query 27231 TTCACAAAGATTTGCATAGCTG 27252 ||||| ||||| ||||| |||| Sbjct 35352 TTCACGAAGATCTGCAT-GCTG 35372 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424906843136952