Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20polyzona_20[genbank_20GCA_5F001939255.1_202017-01-09] 5,321 sequences; 36,629,716 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq3662 107 2e-18 >seq3662 Length=107388 Score = 107 bits (118), Expect = 2e-18 Identities = 171/243 (70%), Gaps = 8/243 (3%) Strand=Plus/Plus Query 122659 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCT 122718 ||||| || ||| | |||||| ||||| || || |||||||| || ||| || || Sbjct 75618 GCAAAGTCGGTGTGCATACCCTCGTCTCGTGAGATCAGTTCATTGGAAAAGGTGAGGCCG 75677 Query 122719 GGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATA 122778 ||||| | || |||||||| | ||| | || ||| ||| |||||||| |||||||| Sbjct 75678 GGCATCAAGCCACGCTTCTTGAGCCAGAATATGGCGGCGAACGACCCGGAAAAGAAGATG 75737 Query 122779 CCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAA---GGAGCGAGACTTTG-CATC 122834 ||||||||| || ||||| | ||| || || ||||| |||||| || | | | Sbjct 75738 CCCTCCACAGCGGCGAACGCTACAAGACGCTCTGCGAACACGGAGCG----TTCGTCCGC 75793 Query 122835 AAACCATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTC 122894 | ||| | ||||| | ||||||||||| || || || || || | |||||| || Sbjct 75794 GATCCAGCGGAGGGCCCAGTCCGCCTTCTTCTTGATGCACGGCACGGTGTCGATGGCGTC 75853 Query 122895 AAA 122897 || Sbjct 75854 GAA 75856 Score = 102 bits (112), Expect = 1e-16 Identities = 331/505 (66%), Gaps = 13/505 (3%) Strand=Plus/Minus Query 122677 CCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACCCCGCTTC 122736 |||||||| || || || || || || |||||| || || ||||| | || |||||| Sbjct 78135 CCCTCATCACGAGATATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAAGCCACGCTTC 78076 Query 122737 TTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAAC 122796 |||||||| | |||| | ||| || || ||||||||||||||||| || || || Sbjct 78075 TTCAACCAGAAGATAGAGGCGAAGGAGCCAGAGAAGAAGATACCCTCGACGGCAGCGAAG 78016 Query 122797 GCAAAAAGGCGTTCGGCGAAGGAGCGAGACT--TTG-CATCAAACCATTTCATTGCCCAT 122853 |||| || || || || || | ||||| ||| | | ||| | | ||||| Sbjct 78015 GCAACGAGACGCTCAGCAAACG---CAGACTCCTTGTCGGAGATCCAGTGAAGAGCCCAG 77959 Query 122854 TTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGCTTCAAATAACTGCT-TCTTTTC 122912 | ||||||||||| ||||| || | || | |||||| || || | |||| | | Sbjct 77958 TCCGCCTTCTTCTTGATACAGGGAATGGTATCGATGGCGTCGAAGAGGTGCTCGCGCTGG 77899 Query 122913 AGATCCATCCTTAATGTATTTGTCAATCAATTTTGAATATGTTTCGCCATGAACCAT-TT 122971 || |||||| |||||| |||| || | ||||| || ||| || | | | Sbjct 77898 CGA-GGATCCTTGATGTATGTGTCGATGAGAAGGGAATAAGTCTCGGAGTGGATGTTCTC 77840 Query 122972 CATTATGGCATTGATATGCGTAGAATGAGCGCGCTTCGCTTATCTGAACCTCATCCGCAA 123031 ||| ||| | || | ||||||| | || || ||| ||| ||||||| || | Sbjct 77839 CATCATGATCTGGA-AGCCGTAGAAGCAACGAGCCTCGGCCGCCTGGACCTCATTCGAGA 77781 Query 123032 AATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCAGCAAAGAATGCCAGGATGT 123091 | | || ||||| || || ||||||||| |||||||||| || || | || Sbjct 77780 ACCGCTCGACGAGGTTCTCGTTGACGATACCATCGGACGCAGCAAAGAACGCGAGAACGT 77721 Query 123092 ACTTTATGAATTTCTTTTCATTTTCATTCA---GGGTCTTCCAGTCGTCAAGATCTTTGG 123148 | ||||| | ||| | || |||| || | |||||||||| || || |||| Sbjct 77720 GCGAGATGAAGTGACGTTCGTCGTCGTTCAGGCGGTTGTTCCAGTCGTGGAGGTCCTTGG 77661 Query 123149 ACAAATCAACTTCTTCCGCAGTCCA 123173 ||| || | || || || ||||| Sbjct 77660 ACAGGTCCATCTCCTCAGCCGTCCA 77636 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627990228021600