Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20polyzona_20[genbank_20GCA_5F001939255.1_202017-01-09] 5,321 sequences; 36,629,716 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq3662 140 4e-28 >seq3662 Length=107388 Score = 140 bits (154), Expect = 4e-28 Identities = 172/232 (74%), Gaps = 6/232 (3%) Strand=Plus/Plus Query 94709 AGCAGCTCTTTGAAGCCATCCAAACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTA 94768 |||| ||||| || |||||| | || |||| ||||| | ||||| ||||| |||||| Sbjct 77907 AGCACCTCTTCGACGCCATCGATACCATTCCCTGTATCAAGAAGAAGGCGGACTGGGCTC 77966 Query 94769 TGAAGTGGTT-TGATACAA--AGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGT 94825 | | ||| | | |||| |||| | | ||||||||||| ||| | || || || Sbjct 77967 TTCACTGGATCTCCGACAAGGAGTC---TGCGTTTGCTGAGCGTCTCGTTGCCTTCGCTG 78023 Query 94826 GTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAG 94885 || |||||||||||||||||||| |||||| | |||| | ||| | |||||||| | Sbjct 78024 CCGTCGAGGGTATCTTCTTCTCTGGCTCCTTCGCCTCTATCTTCTGGTTGAAGAAGCGTG 78083 Query 94886 GTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGG 94937 | | ||||| || || ||||||||||||||| || |||||||| ||||| Sbjct 78084 GCTTGATGCCCGGCCTGACCTTCTCCAACGAGCTCATATCTCGTGATGAGGG 78135 Score = 95.1 bits (104), Expect = 1e-14 Identities = 170/246 (69%), Gaps = 8/246 (3%) Strand=Plus/Minus Query 94714 CTCTTTGAAGCCATCCAAACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAG 94773 ||||| || |||||| | || || ||||| || | ||||| ||||| ||||| | Sbjct 75859 CTCTTCGACGCCATCGACACCGTGCCGTGCATCAAGAAGAAGGCGGACTGGGCCCTCCGC 75800 Query 94774 TGGTTTGAT-ACAAAGTCGCGTTCC---TTTGCTGAGCGACTCTTCGCATTTGCGTGTGT 94829 ||| | | || || || ||| || || ||||| || | || || || ||| Sbjct 75799 TGGATCGCGGACGAA----CGCTCCGTGTTCGCAGAGCGTCTTGTAGCGTTCGCCGCTGT 75744 Query 94830 TGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCT 94889 ||||| |||||||| || || || ||| ||| || | |||||||||||||| || | Sbjct 75743 GGAGGGCATCTTCTTTTCCGGGTCGTTCGCCGCCATATTCTGGCTCAAGAAGCGTGGCTT 75684 Query 94890 CATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGA 94949 ||||| || ||| ||| ||||| || || ||||| || |||||||| | ||| || Sbjct 75683 GATGCCCGGCCTCACCTTTTCCAATGAACTGATCTCACGAGACGAGGGTATGCACACCGA 75624 Query 94950 GTTTGC 94955 ||||| Sbjct 75623 CTTTGC 75618 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583222005866040