Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20polyzona_20[genbank_20GCA_5F001939255.1_202017-01-09] 5,321 sequences; 36,629,716 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq5274 125 6e-24 >seq5274 Length=138102 Score = 125 bits (138), Expect = 6e-24 Identities = 215/307 (70%), Gaps = 10/307 (3%) Strand=Plus/Plus Query 30118 GGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGAT---GAGG-T 30173 ||||||||||||| | | |||||| || | ||| || | || | |||| | || | Sbjct 114944 GGGGTTCCAGGCGGAGAGGATGATACGGCGGTCGGTGGGATCGTGCTTGATCTTGCGGAT 115003 Query 30174 CCACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTGCCCTCATG-TCCGTG 30232 ||| | || |||||||| || || | || | |||||| || ||| | | | Sbjct 115004 GCACTCC----TGGAGCTGATCGACGCCTTTGCCAGTGTAGTCCGCA-TCACAATTCTCG 115058 Query 30233 TACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCC 30292 |||| || ||||| |||| ||||||||| || || || || || ||||| ||||| Sbjct 115059 TACTGCGCCCCGAAGTGCCGCCACTGGAAGCCATAAACGGGACCGAGGTCACCCTCGCGT 115118 Query 30293 CTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTT 30352 | ||| ||| || | |||| | | || ||| |||| || ||| ||||||||||||| Sbjct 115119 CGGTGTCCGAGACCGCGCTTGGCGAGGAATTCTTTGGAGCCATTGCCGTCCCAGATCTTG 115178 Query 30353 ACCCCCTTCTCAGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCC 30412 || |||||| | ||||||| || |||| |||| | || ||| |||||| || ||||| Sbjct 115179 ACGCCCTTCACGGAGAGCTGCTTTGAGTCTGTGCAGCCGTTGATGAACCAGAGGAGCTCT 115238 Query 30413 TCCACGA 30419 || |||| Sbjct 115239 TCAACGA 115245 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406284050897532