Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20polyzona_20[genbank_20GCA_5F001939255.1_202017-01-09] 5,321 sequences; 36,629,716 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq633 163 2e-35 seq4520 143 2e-29 seq145 118 8e-22 seq905 84.2 2e-11 seq2370 82.4 5e-11 >seq633 Length=42484 Score = 163 bits (180), Expect = 2e-35 Identities = 162/210 (77%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || |||||||| ||||||||||| ||||||||||| || | || ||| |||| || Sbjct 34544 ACGAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGACAGCGTGCGGCCGTCCTCA 34603 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| ||||| ||||| | |||||||| || | ||| | ||| ||||| ||| Sbjct 34604 AGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCAGGAGGGATACCCTCCTTGTCCTGG 34663 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 |||||| ||||| | | || ||||| | ||| || ||||||| ||| |||||||| Sbjct 34664 ATCTTCGCCTTCACGTTATCAATCGTGTCCGAGGACTCAACCTCCAACGTGATCGTCTTG 34723 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 |||||||| ||||| |||||||| |||||| Sbjct 34724 CCCGTGAGCGTCTTGACGAAGATCTGCATG 34753 Score = 154 bits (170), Expect = 1e-32 Identities = 165/217 (76%), Gaps = 1/217 (0%) Strand=Plus/Plus Query 44128 CACC-AGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGT 44186 |||| ||||| || || |||||| || ||||||||||| | ||| |||| |||| | Sbjct 35158 CACCGAGGTGCAGGGTAGACTCCTTCTGAATGTTGTAATCCGAGAGGGTGCGCCCGTCCT 35217 Query 44187 CCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCG 44246 | |||||||||||||| ||||| | ||||||||| || | ||| | |||||||| ||| Sbjct 35218 CAAGCTGCTTCCCGGCGAAGATGAGACGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCCT 35277 Query 44247 TTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||| ||| | | | ||||| || | ||| || ||||| | ||| || |||| Sbjct 35278 GGATCTTGGCCTTGACGTTGTCGATGGTATCCGAGGACTCGACCTCGAGCGTGATGGTCT 35337 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCATGATGTG 44343 | || |||||||||||||||||||| |||||| |||| Sbjct 35338 TGCCGGTGAGGGTCTTCACGAAGATCTGCATGCTGTG 35374 Score = 129 bits (142), Expect = 4e-25 Identities = 156/211 (74%), Gaps = 1/211 (0%) Strand=Plus/Plus Query 44128 CACC-AGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGT 44186 |||| || || || ||||||||||| |||||||||||||||| ||| ||| | || | Sbjct 34878 CACCGAGATGGAGGGTGCTCTCCTTCTGGATGTTGTAATCGGAGAGGGTGCGGCCATCCT 34937 Query 44187 CCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCG 44246 ||| |||||| || |||||||||| |||||||| || | ||| | ||| ||||| || Sbjct 34938 CCAACTGCTTGCCCGCAAAGATCAGGCGCTGCTGGTCCGGAGGAATACCCTCCTTGTCTT 34997 Query 44247 TTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 |||||| ||| | | | || ||||||| || || ||||| | || || |||| Sbjct 34998 GGATCTTCGCCTTGACGTTGTCGATAGTGTCGGACGACTCGACCTCGAGAGTGATGGTCT 35057 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | || || | |||||| || ||||| ||||| Sbjct 35058 TGCCGGTCAAGGTCTTGACAAAGATCTGCAT 35088 >seq4520 Length=427429 Score = 143 bits (158), Expect = 2e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || || ||||| || |||||||||||||||||| |||| ||| || | || || Sbjct 157689 ACAAGATGAAGAGTCGACTCCTTTTGGATGTTGTAGTCGGAGAGGGTACGGCCATCCTCG 157630 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| ||||||||||| | ||| ||||| || | ||| | || ||||| ||| Sbjct 157629 AGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGG 157570 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 |||||| ||||| | | |||||||| | || || ||||| | ||| |||||||| Sbjct 157569 ATCTTCGCCTTCACATTGTCGATGGTGTCTGAAGACTCGACCTCGAGCGTGATCGTCTTG 157510 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||||||||||| || ||||| ||||| Sbjct 157509 CCCGTGAGGGTCTTGACAAAGATCTGCAT 157481 Score = 131 bits (144), Expect = 1e-25 Identities = 157/212 (74%), Gaps = 1/212 (0%) Strand=Plus/Minus Query 44128 CACCA-GGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGT 44186 ||||| |||| ||||| |||||| ||||||||||| || | ||| ||| |||| | Sbjct 158429 CACCAAGGTGGAGCGTAGACTCCTTCTGGATGTTGTAGTCAGAGAGCGTGCGACCGTCCT 158370 Query 44187 CCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCG 44246 ||| |||||| || || ||||| | ||||||||||| | || | || ||||| ||| Sbjct 158369 CCAACTGCTTTCCAGCGAAGATAAGCCGCTGCTGATCCGGGGGAATGCCCTCCTTATCCT 158310 Query 44247 TTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 |||||| ||||| | | || ||||| | ||| || ||||| | ||| ||||||| Sbjct 158309 GGATCTTCGCCTTCACGTTGTCGATCGTGTCTGAGGACTCAACCTCTAGCGTGATCGTCT 158250 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 | || ||||| ||||| ||||| || |||||| Sbjct 158249 TCCCTGTGAGCGTCTTGACGAAAATCTGCATG 158218 Score = 127 bits (140), Expect = 1e-24 Identities = 154/207 (74%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 44132 AGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGC 44191 |||||||| || |||||| || ||||||||||||| | || |||| || ||| Sbjct 157914 AGGTGAAGGGTAGACTCCTTCTGAATGTTGTAATCGGACAACGTCCGGCCGTCCTCAAGC 157855 Query 44192 TGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATC 44251 ||||| |||||||||||||| |||||||| || | || | || ||||| ||| ||| Sbjct 157854 TGCTTGCCGGCAAAGATCAAGCGCTGCTGGTCCGGGGGAATCCCCTCCTTGTCCTGAATC 157795 Query 44252 TTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCC 44310 || ||| | | ||| | ||||| |||| || || ||||| | || |||||||| || Sbjct 157794 TT-TGCCTTGACGTTGTCGATGGTATCGGACGACTCGACCTCAAGGGTGATCGTCTTGCC 157736 Query 44311 CGTGAGGGTCTTCACGAAGATTTGCAT 44337 || | |||||||||||||||||||| Sbjct 157735 GGTCAACGTCTTCACGAAGATTTGCAT 157709 Score = 107 bits (118), Expect = 1e-18 Identities = 152/211 (72%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || |||||||| || ||||||||||||||||||||| | || ||| | || ||| Sbjct 158199 ACGAGGTGAAGAGTCGACTCCTTTTGGATGTTGTAATCCGAAAGAGTGCGACCATCCTCC 158140 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 | |||||| ||||| ||||| | |||||| || || | || | ||| ||||| || Sbjct 158139 AACTGCTTGCCGGCGAAGATAAGACGCTGTTGGTCGGGCGGGATACCCTCCTTGTCTTGG 158080 Query 44249 ATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| ||| | | ||| | || ||||||| || || ||||| | || || ||||| Sbjct 158079 ATCTT-TGCCTTGACGTTGTCGATCGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTT 158021 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 || || | ||||| ||||| || |||||| Sbjct 158020 GCCAGTCAACGTCTTGACGAAAATCTGCATG 157990 >seq145 Length=336 Score = 118 bits (130), Expect = 8e-22 Identities = 154/211 (73%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || ||||| ||||| |||||| |||||||||||||| | ||| || |||| || Sbjct 72 ACAAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCCGAGAGGGTACGGCCGTCCTCA 131 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| || || ||||| | |||||||| || | || | || ||||| ||| Sbjct 132 AGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCGGGCGGAATGCCCTCCTTGTCCTGG 191 Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 |||||| ||| || ||| | || ||||| | || || ||||| | || ||||||| Sbjct 192 ATCTTCGCCTTGACATTGT--CGATCGTGTCCGACGACTCGACCTCGAGAGTGATCGTCT 249 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | ||||| | |||||| |||||||| ||||| Sbjct 250 TCCCCGTCAAGGTCTTGACGAAGATCTGCAT 280 >seq905 Length=41247 Score = 84.2 bits (92), Expect = 2e-11 Identities = 76/96 (79%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 44128 CACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTC 44187 ||||||||| || ||| |||||| ||||||||||| ||| ||| ||| |||| || Sbjct 19022 CACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGGCCGTCCTC 18963 Query 44188 CAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 |||||||| || || ||||||| ||||||||||| Sbjct 18962 GAGCTGCTTGCCCGCGAAGATCAGGCGCTGCTGATC 18927 >seq2370 Length=61181 Score = 82.4 bits (90), Expect = 5e-11 Identities = 75/95 (79%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || |||||||| ||| |||||| ||||||||||| ||| || ||| |||| || Sbjct 54690 ACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTAAGGGTGCGGCCGTCCTCA 54631 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 |||||||| || |||||||||| ||||||||| || Sbjct 54630 AGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTC 54596 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359967054735057