Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20polyzona_20[genbank_20GCA_5F001939255.1_202017-01-09] 5,321 sequences; 36,629,716 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq145 158 1e-33 seq633 150 2e-31 seq4520 140 3e-28 seq905 109 5e-19 seq2370 86.0 6e-12 >seq145 Length=336 Score = 158 bits (174), Expect = 1e-33 Identities = 174/230 (76%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||||||||| ||||| | || || |||||||| ||||||||| ||||| || || || Sbjct 53 GCCGCCGCGGAGACGGAGGACAAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAATCCGA 112 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 |||||| || |||| || ||||||||||| ||||| || |||||||| ||||| | || Sbjct 113 GAGGGTACGGCCGTCCTCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGCTGGTCGGGCGG 172 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCC 41812 || || |||||||||| ||| || ||| || | || | ||||| |||||| Sbjct 173 AATGCCCTCCTTGTCCTGGATCTTCGCCTTGACATTGTCG--ATCGTGTCCGACGACTCG 230 Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||| | || ||||| || ||||||| ||||| ||||| |||||||| Sbjct 231 ACCTCGAGAGTGATCGTCTTCCCCGTCAAGGTCTTGACGAAGATCTGCAT 280 >seq633 Length=42484 Score = 150 bits (166), Expect = 2e-31 Identities = 173/230 (75%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || || || | || || || || |||||||||||||| ||||| ||||| || Sbjct 34525 GCCACCACGGAGGCGAAGGACGAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGA 34584 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 || ||||| |||| || ||||||||||||||||| || || ||||| ||||| | || Sbjct 34585 CAGCGTGCGGCCGTCCTCAAGCTGCTTGCCGGCGAAGATGAGCCGCTGCTGGTCAGGAGG 34644 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 | | |||||||||| ||| || |||| ||| | | ||||| ||||| | Sbjct 34645 GATACCCTCCTTGTCCTGGATCTTCGCCTTC-ACGTTATCAATCGTGTCCGAGGACTCAA 34703 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 |||||| ||| ||||| || ||||| |||||||| ||||| ||||||||| Sbjct 34704 CCTCCAACGTGATCGTCTTGCCCGTGAGCGTCTTGACGAAGATCTGCATG 34753 Score = 141 bits (156), Expect = 9e-29 Identities = 161/212 (76%), Gaps = 3/212 (1%) Strand=Plus/Plus Query 41653 CACC-AGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGT 41711 |||| ||||| || |||||||||||||| ||||| || |||||||||||||| | || | Sbjct 34878 CACCGAGATGGAGGGTGCTCTCCTTCTGGATGTTGTAATCGGAGAGGGTGCGGCCATCCT 34937 Query 41712 CGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCA 41771 | | ||||||||| || || ||||||||||| ||||||| |||| | |||||||| | Sbjct 34938 CCAACTGCTTGCCCGCAAAGATCAGGCGCTGCTGGTCCGGAGGAATACCCTCCTTGT-CT 34996 Query 41772 TGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTT 41830 || | || || | ||| | | | ||||||| |||||| ||||| | || || || Sbjct 34997 TGGATCTTCGCCTTGACGTTGTCGATAGTGTCGGACGACTCGACCTCGAGAGTGATGGTC 35056 Query 41831 TTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || || |||| ||||| || || |||||||| Sbjct 35057 TTGCCGGTCAAGGTCTTGACAAAGATCTGCAT 35088 Score = 125 bits (138), Expect = 7e-24 Identities = 158/213 (74%), Gaps = 3/213 (1%) Strand=Plus/Plus Query 41653 CACC-AGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGT 41711 |||| || ||||| || ||||||||||||||| || || |||||||||||| |||| | Sbjct 35158 CACCGAGGTGCAGGGTAGACTCCTTCTGAATGTTGTAATCCGAGAGGGTGCGCCCGTCCT 35217 Query 41712 CGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCA 41771 | |||||||| |||||||| || || ||||| ||||| | || | || ||||||||| Sbjct 35218 CAAGCTGCTTCCCGGCGAAGATGAGACGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCC- 35276 Query 41772 TGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTT 41830 || | || || | ||| | | | || || ||||| ||||| | ||| || || Sbjct 35277 TGGATCTTGGCCTTGACGTTGTCGATGGTATCCGAGGACTCGACCTCGAGCGTGATGGTC 35336 Query 41831 TTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 || || || || ||||| ||||| ||||||||| Sbjct 35337 TTGCCGGTGAGGGTCTTCACGAAGATCTGCATG 35369 >seq4520 Length=427429 Score = 140 bits (154), Expect = 3e-28 Identities = 161/213 (76%), Gaps = 3/213 (1%) Strand=Plus/Minus Query 41653 CACCA-GATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGT 41711 ||||| | || ||||| ||||||||| ||||| ||||| ||||| ||||| |||| | Sbjct 158429 CACCAAGGTGGAGCGTAGACTCCTTCTGGATGTTGTAGTCAGAGAGCGTGCGACCGTCCT 158370 Query 41712 CGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCA 41771 | | |||||| || ||||| || || ||||| || |||| ||||| || |||||| ||| Sbjct 158369 CCAACTGCTTTCCAGCGAAGATAAGCCGCTGCTGATCCGGGGGAATGCCCTCCTTATCCT 158310 Query 41772 TGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTT 41830 ||| || ||||| || | | | ||||| ||||| ||||| | ||| ||||| Sbjct 158309 GGATCTTCGCCTTCA-CGTTGTCGATCGTGTCTGAGGACTCAACCTCTAGCGTGATCGTC 158251 Query 41831 TTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 || || || |||||||| ||||||||||||||| Sbjct 158250 TTCCCTGTGAGCGTCTTGACGAAAATCTGCATG 158218 Score = 138 bits (152), Expect = 1e-27 Identities = 148/193 (77%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 41671 CTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 41730 ||||||||||||||| || ||||| | || || |||| || |||||||||||||| || Sbjct 157900 CTCCTTCTGAATGTTGTAATCGGACAACGTCCGGCCGTCCTCAAGCTGCTTGCCGGCAAA 157841 Query 41731 TATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGA 41790 |||| |||||| ||||||| ||||| | |||||||||| ||| | ||||| | ||| Sbjct 157840 GATCAAGCGCTGCTGGTCCGGGGGAATCCCCTCCTTGTCC-TGAATCTTTGCCTTGACGT 157782 Query 41791 CGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTA 41849 | | | || ||| |||||| ||||| | || ||||| || || |||| |||||| | Sbjct 157781 TGTCGATGGTATCGGACGACTCGACCTCAAGGGTGATCGTCTTGCCGGTCAACGTCTTCA 157722 Query 41850 CGAAAATCTGCAT 41862 |||| || ||||| Sbjct 157721 CGAAGATTTGCAT 157709 Score = 129 bits (142), Expect = 5e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || ||||| || || |||||| || ||||| ||||||||| Sbjct 157707 CCACCACGGAGACGCAGGACAAGATGAAGAGTCGACTCCTTTTGGATGTTGTAGTCGGAG 157648 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| || | || ||||||||||||||||| || || || || || ||||| | || Sbjct 157647 AGGGTACGGCCATCCTCGAGCTGCTTGCCGGCAAAGATGAGACGTTGCTGGTCGGGAGGG 157588 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||||||| ||| || |||| || | | | ||||| ||||| || Sbjct 157587 ATGCCCTCCTTGTCCTGGATCTTCGCCTTC-ACATTGTCGATGGTGTCTGAAGACTCGAC 157529 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||| | ||| ||||| || ||||| || ||||| || || |||||||| Sbjct 157528 CTCGAGCGTGATCGTCTTGCCCGTGAGGGTCTTGACAAAGATCTGCAT 157481 Score = 120 bits (132), Expect = 3e-22 Identities = 166/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| ||||| || || | || || || || || |||||| || ||||| || || || Sbjct 158218 GCCACCGCGCAGGCGGAGGACGAGGTGAAGAGTCGACTCCTTTTGGATGTTGTAATCCGA 158159 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 || ||||| | || || | ||||||||||||||| || || ||||||||||| | || Sbjct 158158 AAGAGTGCGACCATCCTCCAACTGCTTGCCGGCGAAGATAAGACGCTGTTGGTCGGGCGG 158099 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 | | |||||||| | || | ||||| | ||| | | | |||||| ||||| | Sbjct 158098 GATACCCTCCTTGT-CTTGGATCTTTGCCTTGACGTTGTCGATCGTGTCGGAAGACTCAA 158040 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 |||| | || || || || || |||| |||||| ||||||||||||||| Sbjct 158039 CCTCGAGGGTGATGGTCTTGCCAGTCAACGTCTTGACGAAAATCTGCATG 157990 Score = 104 bits (114), Expect = 2e-17 Identities = 98/125 (78%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 ||||| || || || | || || || || || ||||||||| ||||| ||||||||| Sbjct 157479 CCGCCACGGAGGCGGAGGACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCGGAG 157420 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| |||| |||||||||||||| ||||| |||||||| || ||||| | ||| Sbjct 157419 AGTGTGCGGCCGTCCTCGAGCTGCTTGCCCGCGAAGATCAGGCGTTGCTGGTCGGGAGGA 157360 Query 41756 ACGCT 41760 | ||| Sbjct 157359 ATGCT 157355 >seq905 Length=41247 Score = 109 bits (120), Expect = 5e-19 Identities = 99/125 (79%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || || || | |||||| || || ||| ||||||||| ||||| |||||| | Sbjct 19039 CCACCACGAAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTG 18980 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| |||| |||||||||||||| ||||| ||||||||||| || || | ||| Sbjct 18979 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCCGCGAAGATCAGGCGCTGCTGATCAGGGGGG 18920 Query 41756 ACGCT 41760 | ||| Sbjct 18919 ATGCT 18915 >seq2370 Length=61181 Score = 86.0 bits (94), Expect = 6e-12 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 41654 ACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCGTCG 41713 || || || || ||| ||||||||| ||||| |||||| |||||||| |||| || Sbjct 54690 ACAAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTAAGGGTGCGGCCGTCCTCA 54631 Query 41714 AGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCT 41760 ||||||||||| || || ||||| ||||| ||||| | ||| | ||| Sbjct 54630 AGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCGGGGGGGATGCT 54584 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462273251005200