Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20pubescens_20[genbank_20GCA_5F001895945.1_202016-12-09] 1,731 sequences; 39,739,821 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq1532 91.5 3e-13 >seq1532 Length=168184 Score = 91.5 bits (100), Expect = 3e-13 Identities = 134/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 230446 CTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 230505 || || ||||||||||| || ||| | ||||||||||| ||||| || ||||| | Sbjct 155658 CTCATCGGCATGAACGCCACGCTCATGCGCCAGTACATCGAGTTCGTTGCTGACCGTCTA 155717 Query 230506 TTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAG 230565 | ||||| || || ||||| | |||||| | |||||| || | || ||||| Sbjct 155718 CTGGTTGCGCTCGGCGGAGAGAAGTTCTACAACGTCACGAACCCTTTCGACTTCATGGAC 155777 Query 230566 CTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGG 230625 | || ||||| || || || || ||||||||||| ||||| || ||||| || | Sbjct 155778 ATGATCTCGCTCCAGGGCAAAACGAACTTCTTCGAGAAGCGCGTGTCCGACTACTCGAAG 155837 Query 230626 CCTGGTGTGA 230635 | ||||||| Sbjct 155838 GCGGGTGTGA 155847 Score = 84.2 bits (92), Expect = 5e-11 Identities = 117/164 (71%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 230446 CTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 230505 || || ||||||||||| || || ||| | ||||||||||| ||||| || ||||| | Sbjct 152859 CTGATCGGCATGAACGCCGAGCTGATGTGCCAGTACATCGAGTTCGTCGCAGACCGGCTG 152800 Query 230506 TTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAG 230565 | || || || || |||||| ||| | | | |||||| || | || ||||| Sbjct 152799 CTCGTCGCGCTCGGCAGCGAGAAGCACTACCGCGCGACGAACCCGTTCGACTTCATGGAC 152740 Query 230566 CTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGT 230609 | || ||||| || ||||| ||||||||||| ||||| || Sbjct 152739 ATGATCTCGCTCACCGGCAAGACGAACTTCTTCGAGAAGCGCGT 152696 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057800539116530