Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20pubescens_20[genbank_20GCA_5F001895945.1_202016-12-09] 1,731 sequences; 39,739,821 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq865 104 5e-17 >seq865 Length=134895 Score = 104 bits (114), Expect = 5e-17 Identities = 183/267 (69%), Gaps = 0/267 (0%) Strand=Plus/Plus Query 94774 TGAAAGTGGATGCCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTA 94833 |||| || ||| || | || ||||| ||||| |||| | || ||||| || || Sbjct 114560 TGAATGTTGATACCAATGCCACCAGCGGTCTTACTGATGTTCGCGCAGTCCTTGAGCGTC 114619 Query 94834 TCATAAATACCCTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGG 94893 ||||| ||||| ||| ||| || | | || |||||||||||| || ||| Sbjct 114620 GAGTAAATGCCCTCGATGGAATCGTCCTTCATCGACACCAGGAAGCACGAGCTCAGCTGG 114679 Query 94894 GGTGTGACTGTTCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGAC 94953 || || ||| ||| || |||| || || ||||||||||| || || || ||| Sbjct 114680 GGGTTGGGTGTACCAGCGTTGAACAAAGTTGGCGAAGCATGGGTGAAGTACCGCTCAGAC 114739 Query 94954 ATGAGATCATATGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACA 95013 ||||| | || || || ||| || | ||| || | ||||| |||||||||||||| Sbjct 114740 ATGAGGTGGTAGGTCTCGATGGCACGGTCGATATCGGCGCCGTGTATGCCGACAGCCACT 114799 Query 95014 CGCATAATCATGTCCTGAGGGCGCTCA 95040 ||||| |||| | ||| || |||||| Sbjct 114800 CGCATGATCAGATGCTGTGGCCGCTCA 114826 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989562052573105