Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20pubescens_20[genbank_20GCA_5F001895945.1_202016-12-09] 1,731 sequences; 39,739,821 total letters Query= NC_004812.1 Length=156789 Score E Sequences producing significant alignments: (Bits) Value seq1532 84.2 2e-11 >seq1532 Length=168184 Score = 84.2 bits (92), Expect = 2e-11 Identities = 95/125 (76%), Gaps = 12/125 (10%) Strand=Plus/Minus Query 89984 TCGAGGGCATCTTCTTCGCCGCGTCCTTCGCCGCGATCGGCTTCCTGCGCACCAACAAC- 90042 ||||||||||||||||| ||| ||||||||||| ||| ||| || || || | Sbjct 153154 TCGAGGGCATCTTCTTCTCCGGCTCCTTCGCCGCCATC---TTCTGGCTCAAGAAGCGCG 153098 Query 90043 --CTCTTGCGGG---TGACGTGCCAGTCGAACGACCTCATCAGCCGCGACGAGGCCGTGC 90097 ||| ||| || |||||| | |||||||| ||||||||||||||||||| | ||| Sbjct 153097 GACTCATGCCGGGCTTGACGTTC---TCGAACGAGCTCATCAGCCGCGACGAGGGCATGC 153041 Query 90098 ACACC 90102 ||||| Sbjct 153040 ACACC 153036 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 501585946699240