Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20pubescens_20[genbank_20GCA_5F001895945.1_202016-12-09] 1,731 sequences; 39,739,821 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq865 93.3 1e-13 >seq865 Length=134895 Score = 93.3 bits (102), Expect = 1e-13 Identities = 152/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 363736 TACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGAC 363795 |||||| ||| || || |||||||| ||| | || || |||||||| || | || Sbjct 114485 TACATTGCCGGGACGAACGGCTACTCGAACGGGATCGTCCCTATGCTTCGCGTATACGAT 114426 Query 363796 AATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTAT 363855 || || | |||||||| ||||| || |||||| || || || || || || Sbjct 114425 GCGACGGCTCGTTACGTCGATCAGGGGGGTAACAAGCGCCCCGGAGCATTCGCCATCTAC 114366 Query 363856 CTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAA 363915 || ||||| || ||||| | || ||||| |||| || || || ||| || ||| Sbjct 114365 CTTGAGCCCTGGCACGCCGACGTCTTCGAGTTCATTGATCTGCGCAAGAACCACGGCAAA 114306 Query 363916 GAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGG 363954 |||||| | ||||| || ||||||||||| || || ||| Sbjct 114305 GAGGAAGTCCGTGCCCGCGATCTGTTCTACGCGCTCTGG 114267 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303324693653642