Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20pubescens_20[genbank_20GCA_5F001895945.1_202016-12-09] 1,731 sequences; 39,739,821 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq561 136 4e-27 seq1277 132 5e-26 seq1532 104 2e-17 seq865 98.7 9e-16 seq318 98.7 9e-16 seq722 96.9 3e-15 >seq561 Length=237278 Score = 136 bits (150), Expect = 4e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| || |||| ||| ||||| | || | |||||||||||| || |||||||| || Sbjct 97805 GCCGCCACGCAGACGGAGCACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGA 97864 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | ||||| |||||| ||||||||||| ||| |||| | |||||||| |||||||| Sbjct 97865 AAGAGTGCGGCCGTCCTCGAGCTGCTTGCCCGCGAAGATCAGGCGCTGCTGATCCGGAGG 97924 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| || || ||||| || ||| ||||| | || | || |||| ||||||| Sbjct 97925 GATACCCTCCTTGTCCTGAATCTTCGCCTTGACGTTGTCGATGGTGTCGGACGACTCGAC 97984 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| ||| | || ||||| || || || || ||||| |||||||| Sbjct 97985 CTCGAGGGTGATCGTCTTACCCGTCAGGGTCTTGACGAAGATCTGCAT 98032 Score = 123 bits (136), Expect = 2e-23 Identities = 146/198 (74%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 131037 GGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCC 131096 |||||||||||| || |||||||| ||| || |||||| ||||| |||||||| || Sbjct 98116 GGTCGACTCCTTCTGGATGTTGTAGTCGGACAAGGTGCGACCATCCTCAAGCTGCTTTCC 98175 Query 131097 TGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTT 131156 ||| |||| | ||||||||||||||| || || || || ||||| ||| ||| ||| Sbjct 98176 AGCGAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTCGCCTT 98235 Query 131157 GAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGT 131216 || | || | || |||| ||||||| || | ||| | ||| || ||||| | || Sbjct 98236 GACATTGTCGATGGTGTCGGACGACTCGACCTCAAGGGTGATGGTCTTGCCGGTCAAGGT 98295 Query 131217 TTTTACGAAAATCTGCAT 131234 || || || |||||||| Sbjct 98296 CTTGACAAAGATCTGCAT 98313 Score = 98.7 bits (108), Expect = 9e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||||||||| | |||||| || | || | || |||||| || |||||||| || Sbjct 97577 GCCACCGCGGAGACGCAGGACAAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCCGA 97636 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | ||||| |||||| | ||||||||| ||| |||| | ||||||||||| || || Sbjct 97637 GAGCGTGCGGCCGTCCTCCAACTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGCGG 97696 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||| || || ||||| ||| ||| ||| | | || | || || | |||||| | Sbjct 97697 GATCCCCTCCTTGTCCTGGATCTTCGCCTTCACGTTGTCGATCGTGTCCGAGGACTCAAC 97756 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | || | || || || || || || || ||||| ||||||||| Sbjct 97757 CTCCAGCGTGATCGTCTTGCCCGTCAGCGTCTTGACGAAGATCTGCATG 97805 Score = 91.5 bits (100), Expect = 1e-13 Identities = 76/93 (82%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 131037 GGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCC 131096 ||| |||||||| ||||||||||| || | |||||| |||||| |||||||| || Sbjct 98396 GGTGGACTCCTTCTGAATGTTGTAGTCAGAGAGCGTGCGCCCGTCCTCGAGCTGCTTCCC 98455 Query 131097 TGCGTAGATTAAACGCTGCTGGTCCGGAGGGAT 131129 ||| |||| | ||||||||||||||||||||| Sbjct 98456 GGCGAAGATAAGACGCTGCTGGTCCGGAGGGAT 98488 >seq1277 Length=70460 Score = 132 bits (146), Expect = 5e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| ||||||| ||| || || | || | || |||||||| || ||||||||||| Sbjct 15288 GCCGCCGCGCAGACGAAGGACGAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCCGA 15347 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || ||||| |||||| | ||||||||| ||| |||| || ||||||||||| || || Sbjct 15348 CAGAGTGCGTCCGTCCTCCAACTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGGGG 15407 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || || || ||||| ||| ||| ||||| | || | || |||| ||||||| Sbjct 15408 AATACCCTCCTTGTCTTGGATCTTCGCCTTGACGTTGTCGATCGTGTCGGAAGACTCGAC 15467 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| ||||| ||| || || || | || || ||||| |||||||| Sbjct 15468 CTCGAGGGTAATGGTCTTCCCCGTCAACGTCTTGACGAAGATCTGCAT 15515 Score = 127 bits (140), Expect = 2e-24 Identities = 149/199 (75%), Gaps = 2/199 (1%) Strand=Plus/Plus Query 131037 GGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGC-GCGAGTCCTCTAGCTGCTTGC 131095 ||| |||||||| ||||||||||| || || || | || | ||||| |||||||||| Sbjct 15598 GGTAGACTCCTTCTGAATGTTGTAGTCCGACAACGTCCTGCCA-TCCTCGAGCTGCTTGC 15656 Query 131096 CTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCT 131155 | ||| |||| |||||||||||||| || ||||| || || ||||| ||| ||| || Sbjct 15657 CAGCGAAGATCAAACGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGGATCTTCGCCT 15716 Query 131156 TGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAG 131215 | | | || | ||||||| ||||| | |||| ||||| ||| || ||||| | | Sbjct 15717 TCACGTTGTCGATGGTATCGGAAGACTCAACCTCGAGGGTAATGGTCTTGCCGGTCAACG 15776 Query 131216 TTTTTACGAAAATCTGCAT 131234 | || ||||| |||||||| Sbjct 15777 TCTTCACGAAGATCTGCAT 15795 Score = 107 bits (118), Expect = 2e-18 Identities = 155/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 131020 CGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAG 131079 ||||| || | || | ||| |||||||| || |||||||| || | ||||||| Sbjct 15809 CGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGCCCA 15868 Query 131080 TCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTG 131139 ||||| ||||||||||| ||| |||| | ||| ||||| || || ||||| || || ||| Sbjct 15869 TCCTCAAGCTGCTTGCCGGCGAAGATGAGACGTTGCTGATCTGGGGGGATGCCCTCCTTG 15928 Query 131140 TCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACG 131199 || ||| ||| ||| | | || | || || | ||||| | |||| ||| | Sbjct 15929 TCCTGGATCTTCGCCTTCACATTGTCGATGGTGTCCGACGACTCAACCTCGAGGGTGATC 15988 Query 131200 GTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGACT 131238 || || || || || || || ||||| ||||||||| || Sbjct 15989 GTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCATGCCT 16027 Score = 100 bits (110), Expect = 3e-16 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097 ||||||||||| || |||||||| ||| | ||||| |||||| | |||||| || Sbjct 15091 GTCGACTCCTTCTGGATGTTGTAGTCGGAGAGCGTGCGGCCGTCCTCCAACTGCTTCCCA 15150 Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157 || |||| | |||||||||||| |||||||| || || || || || ||| ||| Sbjct 15151 GCAAAGATGAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTATCCTGAATCTTCGCCTTC 15210 Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTT 131217 | | || | || |||| |||||| | || | || | || || ||||| || || Sbjct 15211 ACGTTGTCGATCGTGTCGGAGGACTCCACCTCCAGCGTGATCGTCTTCCCGGTGAGCGTC 15270 Query 131218 TTTACGAAAATCTGCATG 131235 || ||||| ||||||||| Sbjct 15271 TTGACGAAGATCTGCATG 15288 Score = 82.4 bits (90), Expect = 7e-11 Identities = 92/123 (75%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| ||||| | ||| || || | ||| | ||| |||||||| || |||||||| || Sbjct 16024 GCCTCCGCGAAGACGGAGAACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGA 16083 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | ||| || |||||| ||||||||||| || |||| | ||||||||||| || || Sbjct 16084 AAGGGTACGGCCGTCCTCGAGCTGCTTGCCCGCAAAGATCAGGCGCTGCTGGTCGGGCGG 16143 Query 131127 GAT 131129 ||| Sbjct 16144 GAT 16146 >seq1532 Length=168184 Score = 104 bits (114), Expect = 2e-17 Identities = 155/215 (72%), Gaps = 4/215 (2%) Strand=Plus/Minus Query 46099 AAGAAAACCGACTGGGCGATGAAGTGGATCA-ACAGCAGCACCGCGACTTTCGCCGAGCG 46157 ||||| | ||||||||| || |||||| | | ||| | || ||| ||||||||| Sbjct 153233 AAGAAGGCAGACTGGGCGTTGCGCTGGATCGCAGACGAGCGCTCCGTCTT-CGCCGAGCG 153175 Query 46158 TATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTTTTGCCGCCATCTT 46217 | || || || || || |||||| |||| || || ||| || ||||||||||| Sbjct 153174 GCTCGTCGCGTTCGCCGCCGTCGAGGGCATCTTCTTCTCCGGCTCCTTCGCCGCCATCTT 153115 Query 46218 TTACATCAA-AACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACGAGCTGATATCGC 46276 | |||| || | || | ||||||| ||| ||||||| |||||||| || | Sbjct 153114 CTGGCTCAAGAAGCGCGGAC-TCATGCCGGGCTTGACGTTCTCGAACGAGCTCATCAGCC 153056 Query 46277 GCGACGAGGGCCTGCATACGGACTTTGCGTGTCTC 46311 ||||||||||| |||| || ||||||||||||||| Sbjct 153055 GCGACGAGGGCATGCACACCGACTTTGCGTGTCTC 153021 Score = 93.3 bits (102), Expect = 4e-14 Identities = 117/161 (73%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 46147 TTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTTTT 46206 ||| | |||||| | | ||||| || ||| |||||| |||| || || ||| ||| Sbjct 155334 TTCTCTGAGCGTCTCATTGCCTTCGCCGCTGTCGAGGGCATCTTCTTCTCCGGCTCTTTC 155393 Query 46207 GCCGCCATCTTTTACATCAAAACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACGAG 46266 ||| ||||||| | |||| | ||| | ||||| || || || || ||||||| Sbjct 155394 GCCTCCATCTTCTGGCTCAAGAAGCGTGGCTTGATGCCTGGGCTCACCTTCTCCAACGAG 155453 Query 46267 CTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTG 46307 ||||| || |||||||| ||| |||| |||||||| ||||| Sbjct 155454 CTGATCTCTCGCGACGAAGGCATGCACACGGACTTCGCGTG 155494 Score = 86.0 bits (94), Expect = 6e-12 Identities = 125/174 (72%), Gaps = 2/174 (1%) Strand=Plus/Minus Query 46423 CTGCTGGGCATGAACGCACAGTCAATGTGCGACTACATCGAGTTTGTAGCGGACCGACTG 46482 ||| | ||||||||||| || |||||| | ||||||||||| || || ||||| ||| Sbjct 152859 CTGATCGGCATGAACGCCGAGCTGATGTGCCAGTACATCGAGTTCGTCGCAGACCGGCTG 152800 Query 46483 CTCGTGCAGCTTCACCAGC-CGAAGCATTTTCACGCGCGCAATCCATTTGAGTTTATGAA 46541 ||||| || || |||| |||||| | | |||| || || || || || ||| | Sbjct 152799 CTCGTCGCGC-TCGGCAGCGAGAAGCACTACCGCGCGACGAACCCGTTCGACTTCATGGA 152741 Query 46542 CAACATCTCCCTGGAGGGCAAAACTAATTTTTTCGAAAAGCGCGTCGGCGAGTA 46595 || ||||| || ||||| || || || ||||| |||||||| |||||| Sbjct 152740 CATGATCTCGCTCACCGGCAAGACGAACTTCTTCGAGAAGCGCGTGTCCGAGTA 152687 >seq865 Length=134895 Score = 98.7 bits (108), Expect = 9e-16 Identities = 255/384 (66%), Gaps = 6/384 (2%) Strand=Plus/Plus Query 145108 CGTGAAGGGTTCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCAT 145167 |||| | || || || ||||||| ||||||| ||| ||| |||| ||||| ||||| Sbjct 113304 CGTGTAAGGCTCGAAGCACTCGTTGTTGCCCAAGATCTGACTCGTCGAGGCGGTAGGCAT 113363 Query 145168 GTACGCCACCAATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACC 145227 || || | || ||||| || || ||||||| | | | |||| || | Sbjct 113364 CGGGGCAACAAGCAACGAATTACGGAGACCGTGCTGCGCAACCTTCGCCTTGAGGCTCGT 113423 Query 145228 CCAATCCCATAGCGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTCGCT 145287 ||| ||||| || || || | | | |||| | ||||||||| | |||||||| Sbjct 113424 CCAGTCCCAGAGGTCCGTAGGAGTGATGCCCCAGAGGTCGTACTGGAGCTTGCCCTCGGA 113483 Query 145288 GGCGGGGCTGCCTTGAAAGGAACTGTAACTGCCCCAAGTTTTG-GCGAGCTCGCAACTCG 145346 |||||||||||| || | | ||| | ||| || | || || | |||||| |||| Sbjct 113484 GGCGGGGCTGCCCTGGTACGTCTCGTAGGT-CCCGAACTGCTGTGCCATCTCGCAGCTCG 113542 Query 145347 CCTCCAGAGCGCCGAA--ATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGCTTC 145404 |||| || ||||| | || || |||||| || ||| ||||||| ||| || Sbjct 113543 CCTC--GACCGCCGCATGGTAGATGGTCTCGAAGATCTGCTGGTTGAGCTTGCGCGCCTC 113600 Query 145405 ATCGCTCTCGTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCAC 145464 | ||| ||| | ||||| || ||| | || ||||| || | || || | ||||| Sbjct 113601 AACGCCATCGAAGGGCATCCGAAGCGCCATGAACGCATCCGCCAAGCCTTGCACGCCCAC 113660 Query 145465 GCCGATGGGCCGATGTTTCATGTT 145488 |||||||| || || |||||| Sbjct 113661 ACCGATGGGACGGTGGCGCATGTT 113684 >seq318 Length=85141 Score = 98.7 bits (108), Expect = 9e-16 Identities = 95/122 (78%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| ||||||||| | || | || |||||||| || |||||||| ||||| Sbjct 71656 CCACCACGCAGACGCAGCACCAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTG 71715 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||||| ||||||||||| ||| |||| | ||||||||||| || || Sbjct 71716 AGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGGGGA 71775 Query 131128 AT 131129 || Sbjct 71776 AT 71777 >seq722 Length=257698 Score = 96.9 bits (106), Expect = 3e-15 Identities = 77/93 (83%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 131037 GGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCC 131096 ||| |||||||| ||||||||||| ||||| | ||| || |||||| ||||||||||| Sbjct 226029 GGTGGACTCCTTCTGAATGTTGTAGTCGCTGAGGGTACGGCCGTCCTCGAGCTGCTTGCC 226088 Query 131097 TGCGTAGATTAAACGCTGCTGGTCCGGAGGGAT 131129 ||| |||| | |||||||||||| || ||||| Sbjct 226089 AGCGAAGATCAGACGCTGCTGGTCGGGGGGGAT 226121 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472002586823040