Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20pubescens_20[genbank_20GCA_5F001895945.1_202016-12-09] 1,731 sequences; 39,739,821 total letters Query= NC_008187.1 Length=191100 Score E Sequences producing significant alignments: (Bits) Value seq1544 91.5 2e-13 >seq1544 Length=70546 Score = 91.5 bits (100), Expect = 2e-13 Identities = 107/145 (74%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 15054 AGATTGGCGACAAGTTTTGCTCTGGTATGGCGCAAAAGGGCACGTGCGGCATGATTTTCC 15113 |||| ||||||||||| ||| || | || ||||| || ||| || | | || Sbjct 23876 AGATCGGCGACAAGTTCGCCTCACGTCACGGACAGAAGGGTACTATCGGTATCACCTACC 23817 Query 15114 CCCAGGAAGACATGCCCTTTACCGCGTCAGGCATGACGCCCGACATTATCATCAACCCCA 15173 |||||| |||||||| || || ||| ||||| ||||||||||| ||||||||||| Sbjct 23816 GCCAGGAGGACATGCCGTTCACGGCGGAGGGCATCACGCCCGACATCATCATCAACCCGC 23757 Query 15174 ACTGCATCCCGTCCCGCATGACCAT 15198 || ||| || ||||| |||||||| Sbjct 23756 ACGCCATTCCCTCCCGTATGACCAT 23732 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 611378771005600