Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20pubescens_20[genbank_20GCA_5F001895945.1_202016-12-09] 1,731 sequences; 39,739,821 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq1532 159 4e-34 >seq1532 Length=168184 Score = 159 bits (176), Expect = 4e-34 Identities = 372/558 (67%), Gaps = 5/558 (1%) Strand=Plus/Plus Query 93092 CACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAAA 93151 |||||||||||||| || | || ||||| || || | ||| || ||| || || Sbjct 153025 CACGCAAAGTCGGTGTGCATGCCCTCGTCGCGGCTGATGAGCTCGTTCGAGAACGTCAAG 153084 Query 93152 CCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaaT 93211 || || | ||||| || ||||||||||| || || | || || || || || || Sbjct 153085 CCCGGCATGAGTCCGCGCTTCTTGAGCCAGAAGATGGCGGCGAAGGAGCCGGAGAAGAAG 153144 Query 93212 ATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCG-GAATTACTGCT 93270 || || || ||||| || || || || | || ||||| || | | | |||| Sbjct 153145 ATGCCCTCGACGGCGGCGAACGCGACGAGCCGCTCGGCGAAGACGGAGCGCTCGTCTGC- 153203 Query 93271 GATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTT 93330 |||||| || ||||| || || || ||||| || || || | || ||||| |||| Sbjct 153204 GATCCAGCGCAACGCCCAGTCTGCCTTCTTCTTGATGCACGGAATGGTGTCGATCGCGTC 153263 Query 93331 AAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACAT 93390 || ||||| | || || | | || || ||||| || ||||| | || || || | Sbjct 153264 GAAGAGGTAGGCGCGTTCTGCGGGGTCGCGGATGTAGGTGTCGATGAGGAGCGAGTATGT 153323 Query 93391 TTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGAT 93450 || || || || || ||||| |||||||| |||||||| || | || |||| | Sbjct 153324 CTCGGAGTGTACGTTTTCCATCATGATTTGGAAGCCGTAGAAGCAGCGGGCCTCCGCGGC 153383 Query 93451 CTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGC 93510 |||||| || | || || | ||| |||||||| || |||||||| || || || || || Sbjct 153384 CTGCACCTCGTTGGAGAACCGCTCGACGAGATTCTCGTTGACTATGCCGTCTGAAGCGGC 153443 Query 93511 aaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAGCTTATC---CCA 93567 || || || | | | || || ||| ||| | ||| || ||||| || ||| Sbjct 153444 GAAGAAGGCGAGCACGTAGGAGATGAAGTGTCGCTCGTTATCGTTCAGCTTGTCGCTCCA 153503 Query 93568 ATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTT 93627 || ||||| | ||| || | | || ||||| ||||| ||||| |||| || | Sbjct 153504 GTCCATGAGATCGTATGAGAGGTTAATCTCCTCGACCGTCCAGAACGACGCTTGGGCGGT 153563 Query 93628 TTTGTACATATCCCATAT 93645 |||||||| | |||||| Sbjct 153564 CTTGTACATCTGCCATAT 153581 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556848750924440