Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20pubescens_20[genbank_20GCA_5F001895945.1_202016-12-09] 1,731 sequences; 39,739,821 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq590 104 2e-17 >seq590 Length=36723 Score = 104 bits (114), Expect = 2e-17 Identities = 165/237 (70%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 20486 TGGTCAAACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACGTACGCCGCCCCAAAGTGC 20545 ||||||| |||| ||| || || || || || |||| | |||| || ||||||||| Sbjct 25522 TGGTCAACGCCCTTGCCCGTGTATTCCGCGTCGCAGTCCTCATACGAGGCGCCAAAGTGC 25581 Query 20546 CTCCACTGGAAACCGTAAACAGGTCCCAAATCCCCCTCCCTTCTGTGCGCCAGGCCGCGC 20605 | ||||||||| ||||| || || || | || ||| | | | ||| ||||||||||| Sbjct 25582 CGCCACTGGAAGCCGTAGACGGGCCCGAGGTCGCCCGCGCGCCGGTGGCCCAGGCCGCGC 25641 Query 20606 CCGGCCAGGAACTCCCTGGAGCCATTTTTGTCCCATATCTTGACTCCTGTTCTTGAAAGC 20665 | ||||||||| ||||||| || |||||| ||||||| || | || ||| Sbjct 25642 TTCTCGAGGAACTCCTTGGAGCCGTTACCGTCCCAGATCTTGATGCCCTTGGCGGAGAGC 25701 Query 20666 TCCCTGGAGTCAGTACTCCCCTTCAGAAACCAAAGCAGCTCTTGCACTACGCCTCGC 20722 | | ||||||| || | || | | ||||| || | ||| | || | ||| ||| Sbjct 25702 TGCGTGGAGTCGGTGCAGCCTTGAACGAACCAGAGTAACTCCTCGACGATGCCGCGC 25758 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441363249796040