Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20pubescens_20[genbank_20GCA_5F001895945.1_202016-12-09] 1,731 sequences; 39,739,821 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq1532 123 3e-23 >seq1532 Length=168184 Score = 123 bits (136), Expect = 3e-23 Identities = 175/245 (71%), Gaps = 6/245 (2%) Strand=Plus/Plus Query 126047 GCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCT 126106 ||||| || ||| | |||||||| ||| |||||| || |||||||| || || Sbjct 153028 GCAAAGTCGGTGTGCATGCCCTCGTCGCGGCTGATGAGCTCGTTCGAGAACGTCAAGCCC 153087 Query 126107 GGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATT 126166 |||||||| || |||||||| | |||||| || || || || || ||||||||||| Sbjct 153088 GGCATGAGTCCGCGCTTCTTGAGCCAGAAGATGGCGGCGAAGGAGCCGGAGAAGAAGATG 153147 Query 126167 CCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAA---GGAGCGCGACTTTGTGTCA 126223 ||||| || |||||||| | ||| ||||| || || ||||||| | || | Sbjct 153148 CCCTCGACGGCGGCGAACGCGACGAGCCGCTCGGCGAAGACGGAGCGCTCGTCTG---CG 153204 Query 126224 AACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCA 126283 | ||| || |||||| | ||||| |||| ||| ||||| | ||| | |||||| || Sbjct 153205 ATCCAGCGCAACGCCCAGTCTGCCTTCTTCTTGATGCACGGAATGGTGTCGATCGCGTCG 153264 Query 126284 AAGAG 126288 ||||| Sbjct 153265 AAGAG 153269 Score = 89.7 bits (98), Expect = 6e-13 Identities = 159/228 (70%), Gaps = 8/228 (4%) Strand=Plus/Minus Query 126065 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCCCGCTTC 126124 || ||||| || ||||| || || || |||||| || || ||||| | || |||||| Sbjct 155473 CCTTCGTCGCGAGAGATCAGCTCGTTGGAGAAGGTGAGCCCAGGCATCAAGCCACGCTTC 155414 Query 126125 TTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACACGCGAAC 126184 || | |||||| || | || || || ||||||||||| ||||| ||| ||||| Sbjct 155413 TTGAGCCAGAAGATGGAGGCGAAAGAGCCGGAGAAGAAGATGCCCTCGACAGCGGCGAAG 155354 Query 126185 GCAAAGAGACGCTCAGCAAAGGAGCGC-GACT--TTGT-GTCAAACCACTTCATCGCCCA 126240 |||| ||||||||||| || ||| |||| |||| | | ||| || ||||| Sbjct 155353 GCAATGAGACGCTCAG----AGAACGCAGACTCCTTGTCGGAGATCCAGCGCAGGGCCCA 155298 Query 126241 CTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAG 126288 | ||||| |||| ||| || || | ||| | ||| || || || || Sbjct 155297 GTCGGCCTTCTTCTTGATGCAAGGAATGGTATCGATAGCATCGAACAG 155250 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597340674761480