Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20pubescens_20[genbank_20GCA_5F001895945.1_202016-12-09] 1,731 sequences; 39,739,821 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq865 114 1e-20 >seq865 Length=134895 Score = 114 bits (126), Expect = 1e-20 Identities = 168/238 (71%), Gaps = 0/238 (0%) Strand=Plus/Minus Query 94067 GTTCCTACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCT 94126 |||||||||| ||| || || ||| ||| ||||| ||||||||||||| || || | Sbjct 114490 GTTCCTACATTGCCGGGACGAACGGCTACTCGAACGGGATCGTCCCTATGCTTCGCGTAT 114431 Query 94127 TCAACAACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGG 94186 | | |||| || ||||| || ||||| ||| | | | || | ||||| Sbjct 114430 ACGATGCGACGGCTCGTTACGTCGATCAGGGGGGTAACAAGCGCCCCGGAGCATTCGCCA 114371 Query 94187 TCTATCTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACG 94246 |||| || |||||||||||||| ||||| | ||||| || ||||| |||||||||| Sbjct 114370 TCTACCTTGAGCCCTGGCACGCCGACGTCTTCGAGTTCATTGATCTGCGCAAGAACCACG 114311 Query 94247 GCAACGATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTT 94304 |||| || | | ||| | || || |||||||| |||||| | || || ||||| Sbjct 114310 GCAAAGAGGAAGTCCGTGCCCGCGATCTGTTCTACGCGCTCTGGATACCCGATCTTTT 114253 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494712495426760