Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20pubescens_20[genbank_20GCA_5F001895945.1_202016-12-09] 1,731 sequences; 39,739,821 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq1277 82.4 5e-11 >seq1277 Length=70460 Score = 82.4 bits (90), Expect = 5e-11 Identities = 143/206 (69%), Gaps = 4/206 (2%) Strand=Plus/Plus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAA--TTCTCGCGTCTTCTAATT 15031 ||||||||||| || || || |||||||| || || || | || | || || | | Sbjct 15593 TGAAGGGTAGACTCCTTCTGAATGTTGTAGTCC--GACAACGTCCTGCCATCCTCGAGCT 15650 Query 15032 GTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTT 15091 | ||||||||| | ||||||||||| |||||| || || || |||||||| || | Sbjct 15651 GCTTGCCAGCGAAGATCAAACGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGGATCT 15710 Query 15092 TGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTG 15151 | || || | || || |||||| | || || || | ||||||||| || || | Sbjct 15711 TCGCCTTCACGTTGTCGATGGTATCGGAAGACTCAACCTCGAGGGTAATGGTCTTGCCGG 15770 Query 15152 TCAGAGTTTTTACAAAAATTTGCATA 15177 ||| || || || || || |||||| Sbjct 15771 TCAACGTCTTCACGAAGATCTGCATA 15796 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357384460257335