Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20pubescens_20[genbank_20GCA_5F001895945.1_202016-12-09] 1,731 sequences; 39,739,821 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq1532 118 2e-21 seq865 93.3 7e-14 >seq1532 Length=168184 Score = 118 bits (130), Expect = 2e-21 Identities = 229/335 (68%), Gaps = 11/335 (3%) Strand=Plus/Plus Query 159830 AGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAATCTGCGAGACACG-TTCGTAC-- 159886 || ||||||||||| |||||||| || ||| | ||| || || || || | | Sbjct 152935 AGGAACTCCTTCTCGATCTCGACGGCCTCGACGATAATTTGTAGTACCCGCTTGGGATGT 152994 Query 159887 -CCCGGCTTGCCCAAAATGTGGTCCTTAAACAGGAGGCACGCAAAGTCGCAGTGCAGTCC 159945 |||||| | | |||| ||| ||| ||||| |||||||||||| ||||| || Sbjct 152995 GCCCGGCGT-CGCAAATGGTG------AAATAGGAGACACGCAAAGTCGGTGTGCATGCC 153047 Query 159946 CTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCGGCATGATCCCACGCGGTTT 160005 |||||| || ||||| |||||| || | | | ||||||||||| || ||| || Sbjct 153048 CTCGTCGCGGCTGATGAGCTCGTTCGAGAACGTCAAGCCCGGCATGAGTCCGCGCTTCTT 153107 Query 160006 GAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCCCCTCCACGGCCGCAAACGC 160065 |||||| || ||||| || || | ||| || ||||| ||||| ||||| || ||||| Sbjct 153108 GAGCCAGAAGATGGCGGCGAAGGAGCCGGAGAAGAAGATGCCCTCGACGGCGGCGAACGC 153167 Query 160066 CACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCCACCTTTTGGCCCATTCAGC 160125 ||||||| ||| | || || | ||| | |||| | ||||| || || Sbjct 153168 GACGAGCCGCTCGGCGAAGACGGAGCGCTCGTCTGCGATCCAGCGCAACGCCCAGTCTGC 153227 Query 160126 CTTCTTTGCGATGCACGGCATGCGCTCGACGGCGT 160160 |||||| ||||||||| ||| |||| |||| Sbjct 153228 CTTCTTCTTGATGCACGGAATGGTGTCGATCGCGT 153262 >seq865 Length=134895 Score = 93.3 bits (102), Expect = 7e-14 Identities = 153/221 (69%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 203841 TGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGCCGG 203900 |||| || ||||||| || || | | | || || | | | || ||||||||||||| Sbjct 112856 TGTCGACAGTGAACTTGATCGCCTGCGCAGCGGGGCGCGTGCGAAGGTAGTACATGCCGG 112915 Query 203901 TCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGT 203960 |||| |||||||||| ||| || || | ||||||| | ||| | || | | ||||| Sbjct 112916 TCTTGAGGCCCTTCTTCCAGCCATAGAAGTGCATGCTCGTCAGCTGGCCCGTGGTGGGGG 112975 Query 203961 CGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCGGCCA 204020 || ||| | || || ||||| ||| |||||| | | ||||| ||||| | Sbjct 112976 ACTGCAGGTGGACATTGAGCGACTGCGACTGGCAGATGAATGCTCCACGATCCGCGGCGA 113035 Query 204021 TATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTG 204061 | || || |||||||||| |||||||| || |||||| Sbjct 113036 GGTCGAGAACCTTCTTCTGCGAGATCTCCCAGACGGTCTTG 113076 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795137994829360