Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20pubescens_20[genbank_20GCA_5F001895945.1_202016-12-09] 1,731 sequences; 39,739,821 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq1532 338 6e-88 seq561 127 2e-24 seq1277 122 9e-23 seq318 104 2e-17 >seq1532 Length=168184 Score = 338 bits (374), Expect = 6e-88 Identities = 413/553 (75%), Gaps = 13/553 (2%) Strand=Plus/Plus Query 132895 CAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAG 132954 || ||||||||| |||| ||||||||| | | ||||| ||||| ||| |||||| Sbjct 153025 CACGCAAAGTCGGTGTGCATGCCCTCGTCGCGGCTGATGAGCTCGTTCGAGAACGTCAAG 153084 Query 132955 CCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAG 133014 || |||||||| ||||| || |||||||| || ||||||||||| ||| || |||||| Sbjct 153085 CCCGGCATGAGTCCGCGCTTCTTGAGCCAGAAGATGGCGGCGAAGGAGCCGGAGAAGAAG 153144 Query 133015 ACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAA--CGTGGCTTCTTTGCTGG 133072 | |||||||||||| ||||| || || || |||||| |||| || || || ||| Sbjct 153145 ATGCCCTCGACGGCGGCGAACGCGACGAGCCGCTCGGCGAAGACGGAGCG-CTCGTCTG- 153202 Query 133073 CGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGCGT 133132 |||||||||||| |||||| || ||||| | |||| |||||| || || ||||| |||| Sbjct 153203 CGATCCAGCGCAACGCCCAGTCTGCCTTCTTCTTGATGCACGGAATGGTGTCGATCGCGT 153262 Query 133133 TCAACAAAC-GGAGTTTCTCTTCCGAGGAACGCACGTAGGTGTCGATGAGGGTCGAATAC 133191 || | || | | ||| | | | || | |||||||||||||||| ||| || Sbjct 153263 CGAAGAGGTAGGCGCGT-TCTGCGGGGTCGCGGATGTAGGTGTCGATGAGGAGCGAGTAT 153321 Query 133192 ATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCGACC 133251 | || ||||||||||| ||||| |||||| |||||||| ||||| || ||||| | Sbjct 153322 GTCTCGGAGTGTACGTTTTCCATCATGATTTGGAAGCCGTAGAAGCAGCGGGCCTCCGCG 153381 Query 133252 ACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCG 133311 ||||||| || | | ||| |||||||| ||||| |||||||| |||||||| ||| Sbjct 153382 GCCTGCACCTCGTTGGAGAACCGCTCGACGAGATTCTCGTTGACTATGCCGTCTGAAGCG 153441 Query 133312 GCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCA----AGCGCTC 133367 ||||| ||||| ||||||| |||||| || |||||||| ||||||| |||| Sbjct 153442 GCGAAGAAGGCGAGCACGTAGGAGATGAAGTGTCGCTCGTTATCGTTCAGCTTGTCGCT- 153500 Query 133368 CCAGTCGCGCGTG-TCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGCCTCGG 133426 |||||| | | | || | || |||| | ||||||||| ||||| |||||||| | || Sbjct 153501 CCAGTC-CATGAGATCGTATGAGAGGTTAATCTCCTCGACCGTCCAGAACGACGCTTGGG 153559 Query 133427 CTTTTTTGTACAT 133439 | | |||||||| Sbjct 153560 CGGTCTTGTACAT 153572 Score = 324 bits (358), Expect = 1e-83 Identities = 411/562 (73%), Gaps = 9/562 (2%) Strand=Plus/Minus Query 132884 TGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGC 132943 |||| | |||||| || ||||| |||| ||| ||||| | || || || |||||| Sbjct 155505 TGAAGAGCAAGCACGCGAAGTCCGTGTGCATGCCTTCGTCGCGAGAGATCAGCTCGTTGG 155446 Query 132944 TGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGC 133003 ||| || | || ||||| | ||| || || |||||||| || |||| ||||||| || Sbjct 155445 AGAAGGTGAGCCCAGGCATCAAGCCACGCTTCTTGAGCCAGAAGATGGAGGCGAAAGAGC 155386 Query 133004 CCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTT 133063 | || ||||||| ||||||||| || ||||| || | || ||||| ||||| | | Sbjct 155385 CGGAGAAGAAGATGCCCTCGACAGCGGCGAAGGCAATGAGACGCTCAGAGAACGCAGACT 155326 Query 133064 CTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTT 133123 | ||| || |||||||||||| ||||| |||||||| | |||| ||| || || || | Sbjct 155325 CCTTGTCGGAGATCCAGCGCAGGGCCCAGTCGGCCTTCTTCTTGATGCAAGGAATGGTAT 155266 Query 133124 CGATGGCGTTCAACAAACGGAGTT-TCTCTTCCGAGGAAC--GCACGTAGGTGTCGATGA 133180 |||| || | |||| || ||| | || | | || | | |||||||||||||| Sbjct 155265 CGATAGCATCGAACA---GGCGTTCGCGCTCCTGGGGGTCCTTGATGTAGGTGTCGATGA 155209 Query 133181 GGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACC 133240 || ||| || | || ||||| | ||||||||| ||| || ||||| || ||||| | Sbjct 155208 GGAGCGAGTAGGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCATAGAAGCAGC 155149 Query 133241 GCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGC 133300 | ||||| | | || || || | | ||| |||||||| ||||| ||||||||||||| Sbjct 155148 GAGCCTCAGCAGCTTGGACCTCGTTGGAGAACCGCTCGACGAGATTCTCGTTGACGATGC 155089 Query 133301 CGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCA 133360 |||| ||||||||| || || || |||||| || ||| |||||||||| | | | | Sbjct 155088 CGTCCGAGGCGGCGAAGAACGCGAGAACGTGCGAGACGAAGTGGCGCTCGTCATTGGTGA 155029 Query 133361 AGCG---CTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACG 133417 || | ||||||| || |||||||||| || |||| |||||| |||||||||| | Sbjct 155028 GACGGTTGTTCCAGTCGTGCATGTCCTTGGAGAGATCCATCTCCTCCGCGGTCCAAAAGG 154969 Query 133418 ACGCCTCGGCTTTTTTGTACAT 133439 ||||||| || || |||||||| Sbjct 154968 ACGCCTCAGCCTTCTTGTACAT 154947 >seq561 Length=237278 Score = 127 bits (140), Expect = 2e-24 Identities = 167/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || ||||| || || |||||| |||| |||||| | || Sbjct 98032 ATGCAGATCTTCGTCAAGACCCTGACGGGTAAGACGATCACCCTCGAGGTCGAGTCGTCC 97973 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || | || || | ||||| ||||| || || | || || Sbjct 97972 GACACCATCGACAACG-TCAAGGCGAAGATTCAGGACAAGGAGGGTATCCCTCCGGATCA 97914 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || || | ||||||||| ||||| || |||| ||||| || |||||||| Sbjct 97913 GCAGCGCCTGATCTTCGCGGGCAAGCAGCTCGAGGACGGCCGCACTCTTTCGGACTACAA 97854 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 |||||| ||||| |||| || || | ||||| ||| || | |||||| Sbjct 97853 CATCCAGAAGGAGTCGACCCTCCACCTCGTGCTCCGTCTGCGTGGCGGC 97805 Score = 123 bits (136), Expect = 2e-23 Identities = 169/231 (73%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || ||||| |||||||| || ||||| | || || ||| || | Sbjct 97804 ATGCAGATCTTCGTCAAGACGCTGACGGGCAAGACGATCACGCTGGAGGTTGAGTCCTCG 97745 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || | || |||| ||||| ||||| || || ||||||| Sbjct 97744 GACACGATCGACAACG-TGAAGGCGAAGATCCAGGACAAGGAGGGGATCCCGCCCGACCA 97686 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || || | ||| ||||| ||| |||| |||| ||||| ||| |||||||| Sbjct 97685 GCAGCGCCTGATCTTCGCCGGCAAGCAGTTGGAGGACGGCCGCACGCTCTCGGACTACAA 97626 Query 38423 CATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCC 38472 |||||| ||||| ||| ||||| || | || |||||| | | || |||| Sbjct 97625 CATCCAGAAGGAGAGC-ACGCTCCACCTTGTCCTGCGTCTCCGCGGTGGCC 97576 Score = 116 bits (128), Expect = 4e-21 Identities = 153/211 (73%), Gaps = 1/211 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || | || ||||| ||||||||| | || |||||| | || Sbjct 98313 ATGCAGATCTTTGTCAAGACCTTGACCGGCAAGACCATCACCCTTGAGGTCGAGTCGTCC 98254 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || | || |||| ||||| ||||| |||||| | ||||| Sbjct 98253 GACACCATCGACAATGTCAAGGCGAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAG 98194 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| ||||| | ||| || || ||||| || || | |||||| | |||||||||| Sbjct 98193 CAGCGTCTCATCTTCGCTGGAAAGCAGCTTGAGGATGGTCGCACCTTGTCCGACTACAAC 98134 Query 38424 ATCCAAAAGGAAGCGACGCTGCA-TTTGGTG 38453 ||||| ||||| |||| || || |||||| Sbjct 98133 ATCCAGAAGGAGTCGACCCTTCACCTTGGTG 98103 Score = 95.1 bits (104), Expect = 1e-14 Identities = 147/205 (72%), Gaps = 4/205 (2%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||||||||| || || |||| ||| | || ||| || | || ||| || | | Sbjct 95973 ATGCAAATATTCGTCAAGACCCTCATGGGTCAGACGATCCCCTTGGAGGTCAAGCCATCG 95914 Query 38304 GACAGCGT-GCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | || | || | || |||| ||||| |||| || || ||||||| Sbjct 95913 GACACGATCGGCAGCG-TGAAGGCGAAGATCCAGGACAAGGAGGCGATCCCGTCCGACCA 95855 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||| ||||| | ||| ||| | |||||| |||| ||||| ||| || ||||| Sbjct 95854 ACAGCGTCTCATCTTCGCCAACAAGCCGCTGGAGGACGGCCGCACGCTCTCGGATTACAA 95795 Query 38423 CATCCAAAAGGA-AGCGACGCTGCA 38446 |||||| ||||| ||| ||||| || Sbjct 95794 CATCCAGAAGGAGAGC-ACGCTCCA 95771 Score = 82.4 bits (90), Expect = 8e-11 Identities = 148/210 (70%), Gaps = 5/210 (2%) Strand=Plus/Minus Query 38247 CAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACCGAC 38306 || || ||||| || || | || ||||| ||||||||| | || | | | | ||||| Sbjct 93036 CAGATCTTCGTCAAGACCGTGACCGGCAAGACCATCACCCTGGAGGCCCTGTCGTCCGAC 92977 Query 38307 AGCGT-GCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAAC- 38364 | | | ||||| | || | ||| || | ||||| ||||| | | | ||| | || | Sbjct 92976 ACTATCGAAAACG-TGAAGGCAAAGATTCATGACAAGGAGGGCACTGC-GCCAAACACCC 92919 Query 38365 AGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACA 38424 |||| ||||| | ||| ||||| ||||| || || | || || | ||||||||||| Sbjct 92918 AGCGTCTCATCTTCGCTGGCAAGCAGCTCGAAGATGGCCGAACTTTGTCCGACTACAACA 92859 Query 38425 TCCAAAAGGAAGCGACGCTGCA-TTTGGTG 38453 |||| ||||| |||| ||||| |||||| Sbjct 92858 TCCAGAAGGAGTCGACCCTGCACATTGGTG 92829 >seq1277 Length=70460 Score = 122 bits (134), Expect = 9e-23 Identities = 156/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||||||||| || |||||| |||| || ||| | | Sbjct 16023 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACGATCACCCTCGAGGTTGAGTCGTCG 15964 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || | || |||| ||||| ||||| || ||| | || || Sbjct 15963 GACACCATCGACAATGTGAAGGCGAAGATCCAGGACAAGGAGGGCATCCCCCCAGATCAG 15904 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 || || ||||| | ||| ||||| ||||| || || | |||||||||| ||||||||| Sbjct 15903 CAACGTCTCATCTTCGCCGGCAAGCAGCTTGAGGATGGGCGCACCCTCTCGGACTACAAC 15844 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||||| ||||| | || || || | || ||||| Sbjct 15843 ATCCAGAAGGAGTCCACCCTCCACCTTGTCCTGCG 15809 Score = 118 bits (130), Expect = 1e-21 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || ||| | ||||| || ||||| ||| |||| |||||| | || Sbjct 15515 ATGCAGATCTTCGTCAAGACGTTGACGGGGAAGACCATTACCCTCGAGGTCGAGTCTTCC 15456 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || | || |||| ||||| ||||| |||||| | ||||| Sbjct 15455 GACACGATCGACAACG-TCAAGGCGAAGATCCAAGACAAGGAGGGTATTCCCCCAGACCA 15397 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| | || | ||| ||||| ||| |||| |||| ||||| || || ||||| Sbjct 15396 GCAGCGCTTGATCTTCGCCGGCAAGCAGTTGGAGGACGGACGCACTCTGTCGGATTACAA 15337 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 |||||| ||||| | || || || | || || ||| || | |||||| Sbjct 15336 CATCCAGAAGGAGTCCACTCTTCACCTCGTCCTTCGTCTGCGCGGCGGC 15288 Score = 113 bits (124), Expect = 5e-20 Identities = 149/204 (73%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || |||||||| || || || ||||| | || || ||| || || Sbjct 15287 ATGCAGATCTTCGTCAAGACGCTCACCGGGAAGACGATCACGCTGGAGGTGGAGTCCTCC 15228 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | |||| | || | || || | || || ||||| || || ||||||| Sbjct 15227 GACACGATCGACAACG-TGAAGGCGAAGATTCAGGATAAGGAGGGCATCCCTCCCGACCA 15169 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| ||||| | || || || ||| |||| |||| ||||| ||| ||||||||| Sbjct 15168 GCAGCGTCTCATCTTTGCTGGGAAGCAGTTGGAGGACGGCCGCACGCTCTCCGACTACAA 15109 Query 38423 CATCCAAAAGGAAGCGACGCTGCA 38446 |||||| ||||| ||||||| || Sbjct 15108 CATCCAGAAGGAGTCGACGCTCCA 15085 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/212 (70%), Gaps = 3/212 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || ||| | || ||||| ||||| ||| |||| || ||| | || Sbjct 15795 ATGCAGATCTTCGTGAAGACGTTGACCGGCAAGACCATTACCCTCGAGGTTGAGTCTTCC 15736 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || | | | | |||| | || | || |||| ||||| ||||| || || ||||||| Sbjct 15735 GATACCATCGACAACG-TGAAGGCGAAGATCCAGGACAAGGAGGGCATCCCGCCCGACCA 15677 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| | || | ||| ||||| ||||| || || | | || | |||||||| Sbjct 15676 GCAGCGTTTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCAGGACGTTGTCGGACTACAA 15617 Query 38423 CATCCAAAAGGAAGCGACGCTGCA-TTTGGTG 38453 ||| || ||||| | || || || |||||| Sbjct 15616 CATTCAGAAGGAGTCTACCCTTCACCTTGGTG 15585 >seq318 Length=85141 Score = 104 bits (114), Expect = 2e-17 Identities = 96/122 (79%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 38349 ATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACC 38408 |||||| ||||||| ||||| || || | ||| ||||| ||||| || || | |||||| Sbjct 71777 ATTCCCCCCGACCAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGATGGCCGCACC 71718 Query 38409 CTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGC 38468 |||| ||||||||||||||| ||||| | || || || ||||||||||| || | || Sbjct 71717 CTCAGCGACTACAACATCCAGAAGGAGTCTACTCTCCACCTGGTGCTGCGTCTGCGTGGT 71658 Query 38469 GG 38470 || Sbjct 71657 GG 71656 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500161977511040