Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20pubescens_20[genbank_20GCA_5F001895945.1_202016-12-09] 1,731 sequences; 39,739,821 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq1532 91.5 2e-13 seq1415 86.0 7e-12 seq259 86.0 7e-12 seq1096 82.4 9e-11 seq539 82.4 9e-11 seq423 82.4 9e-11 seq278 82.4 9e-11 seq71 82.4 9e-11 >seq1532 Length=168184 Score = 91.5 bits (100), Expect = 2e-13 Identities = 157/225 (70%), Gaps = 5/225 (2%) Strand=Plus/Minus Query 119514 CCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCTCTTTTC 119573 ||||| || |||||||| ||||| || |||| || |||||||| | || | ||| Sbjct 155473 CCTTCGTCGCGAGAGATCAGCTCGTTGGAGAAGGTGAGCCCAGGCATCAAGCCACGCTTC 155414 Query 119574 TTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAGGCGAAA 119633 || ||||| ||||||| ||| || || |||||||||||||| ||| |||||| Sbjct 155413 TTGAGCCAGAAGATGGAGGCGAAAGAGCCGGAGAAGAAGATGCCCTCGACAGCGGCGAAG 155354 Query 119634 GCGAATAGACGCTCAGCAAAAGGTCGA-GACTTGTC---GAACCACTTGAGAGCCCAGTT 119689 || | |||||||||| | || | || |||||| || ||| || ||||||| Sbjct 155353 GCAATGAGACGCTCAG-AGAACGCAGACTCCTTGTCGGAGATCCAGCGCAGGGCCCAGTC 155295 Query 119690 GGCCTTACGCTCTATGCAGGGGACAGTTTGGATGGCTTCGAAAAG 119734 |||||| || ||||| || | || | ||| || ||||| || Sbjct 155294 GGCCTTCTTCTTGATGCAAGGAATGGTATCGATAGCATCGAACAG 155250 >seq1415 Length=55545 Score = 86.0 bits (94), Expect = 7e-12 Identities = 65/75 (87%), Gaps = 4/75 (5%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCC--CG 136774 ||||||||||||||||||||||||||| |||||||||||||| ||||||| ||| || Sbjct 34817 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGTCGGTTCGATCCCGGCG 34758 Query 136775 TTGGGAACAGCTTTT 136789 |||| |||||||| Sbjct 34757 TTGG--CCAGCTTTT 34745 >seq259 Length=85770 Score = 86.0 bits (94), Expect = 7e-12 Identities = 65/75 (87%), Gaps = 4/75 (5%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCC--CG 136774 ||||||||||||||||||||||||||| |||||||||||||| ||||||| ||| || Sbjct 54917 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGTCGGTTCGATCCCGGCG 54858 Query 136775 TTGGGAACAGCTTTT 136789 |||| |||||||| Sbjct 54857 TTGG--CCAGCTTTT 54845 >seq1096 Length=75590 Score = 82.4 bits (90), Expect = 9e-11 Identities = 57/64 (89%), Gaps = 2/64 (3%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCC--CG 136774 ||||||||||||||||||||||||||| |||||||||||||| ||||||| ||| || Sbjct 29858 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGTCGGTTCGATCCCGGCG 29917 Query 136775 TTGG 136778 |||| Sbjct 29918 TTGG 29921 >seq539 Length=35607 Score = 82.4 bits (90), Expect = 9e-11 Identities = 57/64 (89%), Gaps = 2/64 (3%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCC--CG 136774 ||||||||||||||||||||||||||| |||||||||||||| ||||||| ||| || Sbjct 12227 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGTCGGTTCGATCCCGGCG 12286 Query 136775 TTGG 136778 |||| Sbjct 12287 TTGG 12290 Score = 82.4 bits (90), Expect = 9e-11 Identities = 57/64 (89%), Gaps = 2/64 (3%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCC--CG 136774 ||||||||||||||||||||||||||| |||||||||||||| ||||||| ||| || Sbjct 18629 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGTCGGTTCGATCCCGGCG 18570 Query 136775 TTGG 136778 |||| Sbjct 18569 TTGG 18566 >seq423 Length=125448 Score = 82.4 bits (90), Expect = 9e-11 Identities = 57/64 (89%), Gaps = 2/64 (3%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCC--CG 136774 ||||||||||||||||||||||||||| |||||||||||||| ||||||| ||| || Sbjct 50061 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGTCGGTTCGATCCCGGCG 50002 Query 136775 TTGG 136778 |||| Sbjct 50001 TTGG 49998 Score = 82.4 bits (90), Expect = 9e-11 Identities = 57/64 (89%), Gaps = 2/64 (3%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCC--CG 136774 ||||||||||||||||||||||||||| |||||||||||||| ||||||| ||| || Sbjct 55813 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGTCGGTTCGATCCCGGCG 55872 Query 136775 TTGG 136778 |||| Sbjct 55873 TTGG 55876 >seq278 Length=123182 Score = 82.4 bits (90), Expect = 9e-11 Identities = 57/64 (89%), Gaps = 2/64 (3%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCC--CG 136774 ||||||||||||||||||||||||||| |||||||||||||| ||||||| ||| || Sbjct 40754 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGTCGGTTCGATCCCGGCG 40813 Query 136775 TTGG 136778 |||| Sbjct 40814 TTGG 40817 >seq71 Length=69314 Score = 82.4 bits (90), Expect = 9e-11 Identities = 57/64 (89%), Gaps = 2/64 (3%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCC--CG 136774 ||||||||||||||||||||||||||| |||||||||||||| ||||||| ||| || Sbjct 27387 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGTCGGTTCGATCCCGGCG 27446 Query 136775 TTGG 136778 |||| Sbjct 27447 TTGG 27450 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588963256031800