Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20pubescens_20[genbank_20GCA_5F001895945.1_202016-12-09] 1,731 sequences; 39,739,821 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq117 86.0 5e-11 >seq117 Length=5741 Score = 86.0 bits (94), Expect = 5e-11 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 550409 ACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATT 550468 ||||| || || || || || ||| | ||||| ||||| || || |||||||| ||| Sbjct 3469 ACTGTCCCCGCGTACTTCAACGACGCGCAACGGCAAGCGACCAAGGATGCTGGTACCATT 3410 Query 550469 GCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGA 550528 ||||| || ||||||||||| | ||||| || || || || ||||| || || || || Sbjct 3409 GCTGGTCTCGATGTTCTTCGTGTCATCAACGAGCCGACCGCCGCTGCGCTGGCCTACGGT 3350 Query 550529 CTTGA 550533 ||||| Sbjct 3349 CTTGA 3345 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029204456913190