Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20pubescens_20[genbank_20GCA_5F001895945.1_202016-12-09] 1,731 sequences; 39,739,821 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq1532 84.2 3e-11 >seq1532 Length=168184 Score = 84.2 bits (92), Expect = 3e-11 Identities = 114/159 (72%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 65070 CTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATT 65129 |||||||||||| || | ||||| || || ||||| |||||||||||||| || || Sbjct 153186 CTTCGCCGAGCGGCTCGTCGCGTTCGCCGCCGTCGAGGGCATCTTCTTCTCCGGCTCCTT 153127 Query 65130 CTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGA 65189 | ||| || | ||| | |||||||| || |||||||| ||| | ||||| || || Sbjct 153126 CGCCGCCATCTTCTGGCTCAAGAAGCGCGGACTCATGCCGGGCTTGACGTTCTCGAACGA 153067 Query 65190 ACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGC 65228 || || ||| || ||||| | ||| || ||||| Sbjct 153066 GCTCATCAGCCGCGACGAGGGCATGCACACCGACTTTGC 153028 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596556691725280