Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20pubescens_20[genbank_20GCA_5F001895945.1_202016-12-09] 1,731 sequences; 39,739,821 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq865 167 2e-36 seq1277 116 3e-21 seq561 98.7 9e-16 >seq865 Length=134895 Score = 167 bits (184), Expect = 2e-36 Identities = 299/431 (69%), Gaps = 12/431 (3%) Strand=Plus/Plus Query 138553 GTGAAAGGCTCAAACGATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATG 138612 ||| ||||||| || | |||||||| |||| |||||| ||| | ||||| ||||| Sbjct 113305 GTGTAAGGCTCGAAGCACTCGTTGTTGCCCAAGATCTGACTCGTCGAGGCGGTAGGCATC 113364 Query 138613 TACGCCACCAAAAGAGAATTCCGTAAACCGTGAAGCTTGA--TTCGTTCCTTGAGCGACG 138670 || || | | ||||| || | |||||| || | |||| ||||||| || Sbjct 113365 GGGGCAACAAGCAACGAATTACGGAGACCGTGCTGCGCAACCTTCG--CCTTGAGGCTCG 113422 Query 138671 ACCAGTCCCACAAATCGCTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAAC 138730 ||||||||| | || |||| | || ||| | |||||||| | | | ||| Sbjct 113423 TCCAGTCCCAGAGGTCCGTAGGAGTGATGCCCCAGAGGTCGTACTGGAGCTTGCCCTCGG 113482 Query 138731 TTGCGGGACTGCCTTCGTACGAATCGTATACACCAAACTCTTGCGCCAACTCGTTGCTCG 138790 ||||| ||||| | ||||| ||||| || |||| || |||| |||| ||||| Sbjct 113483 AGGCGGGGCTGCCCTGGTACGTCTCGTAGGTCCCGAACTGCTGTGCCATCTCGCAGCTCG 113542 Query 138791 CCTCGAGCGCACCATAGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGG 138850 |||||| ||| ||| ||| || || ||| |||||||| |||||| || ||||| Sbjct 113543 CCTCGACCGCCGCATGGTAGATGGTCTCGAAGATCTGCTGGTTGAGCTTGCGCGCCTCAA 113602 Query 138851 CGCTCTCGTACGGCATGCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTC 138910 ||| ||| | ||||| || ||| | ||||||| || |||| |||||||||||||| | Sbjct 113603 CGCCATCGAAGGGCATCCGAAGCGCCATGAACGCATCCGCCAAGCCTTGCACGCCCACAC 113662 Query 138911 CGACAGGGCGATGGCGCAGATTTG-ACGCTTTTGCGGCTTCG---ATAGGATAATAGTTT 138966 ||| || || ||||||| |||| ||| ||| ||| ||| || || || | ||| Sbjct 113663 CGATGGGACGGTGGCGCATGTTTGAACG---TTG-GGCCTCGGGAATGGGGTAGTGGTTG 113718 Query 138967 ACATCGATGAT 138977 || |||||||| Sbjct 113719 ACGTCGATGAT 113729 >seq1277 Length=70460 Score = 116 bits (128), Expect = 3e-21 Identities = 153/211 (73%), Gaps = 1/211 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || ||| | ||||| || || ||||| ||||| || || | || Sbjct 15795 ATGCAGATCTTCGTGAAGACGTTGACCGGCAAGACCATTACCCTCGAGGTTGAGTCTTCC 15736 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 || || | || | || || |||||||| ||||| || || || || ||||| || Sbjct 15735 GATACCATCGACAACGTGAAGGCGAAGATCCAGGACAAGGAGGGCATCCCGCCCGACCAG 15676 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||||||||||| || || || ||||| |||||| || | |||| || || ||| Sbjct 15675 CAGCGTTTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCAGGACGTTGTCGGACTACAAC 15616 Query 24884 ATTCAAAAGGAATCGACACTACA-CTTGGTG 24913 ||||| ||||| || || || || ||||||| Sbjct 15615 ATTCAGAAGGAGTCTACCCTTCACCTTGGTG 15585 Score = 111 bits (122), Expect = 1e-19 Identities = 165/231 (71%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || ||| | || || || || ||||| ||||| || || | || Sbjct 15515 ATGCAGATCTTCGTCAAGACGTTGACGGGGAAGACCATTACCCTCGAGGTCGAGTCTTCC 15456 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||||||||| || || || || || || || Sbjct 15455 GACACGATCGACAACGTCAAGGCGAAGATCCAAGACAAGGAGGGTATTCCCCCAGACCAG 15396 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACA---TGTCAGATTAT 24880 || || |||||||| ||||| || ||| ||||||| || || || |||| ||||| Sbjct 15395 CAGCGCTTGATCTTCGCCGGCAAGCAGTTGGAGGA--CG-GACGCACTCTGTCGGATTAC 15339 Query 24881 AACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 ||||| || ||||| || || || ||| | || | || ||||||| ||| Sbjct 15338 AACATCCAGAAGGAGTCCACTCTTCACCTCGTCCTTCGTCTGCGCGGCGGC 15288 Score = 105 bits (116), Expect = 6e-18 Identities = 148/208 (71%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || ||||| ||||| || || || ||||| || || || || || Sbjct 15287 ATGCAGATCTTCGTCAAGACGCTCACCGGGAAGACGATCACGCTGGAGGTGGAGTCCTCC 15228 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||| || || || || || || |||||||| || Sbjct 15227 GACACGATCGACAACGTGAAGGCGAAGATTCAGGATAAGGAGGGCATCCCTCCCGACCAG 15168 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | |||||||| ||||| ||| ||||||| | | | || || || ||| Sbjct 15167 CAGCGTCTCATCTTTGCTGGGAAGCAGTTGGAGGACGGCCGCACGCTCTCCGACTACAAC 15108 Query 24884 ATTCAAAAGGAATCGACACTACACTTGG 24911 || || ||||| ||||| || ||| ||| Sbjct 15107 ATCCAGAAGGAGTCGACGCTCCACCTGG 15080 Score = 100 bits (110), Expect = 3e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || || || || || || ||||| || || | | Sbjct 16023 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACGATCACCCTCGAGGTTGAGTCGTCG 15964 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| || || || || || ||||| Sbjct 15963 GACACCATCGACAATGTGAAGGCGAAGATCCAGGACAAGGAGGGCATCCCCCCAGATCAG 15904 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 |||||| | ||||| ||||| || ||||| |||||| | | | | | || || || ||| Sbjct 15903 CAACGTCTCATCTTCGCCGGCAAGCAGCTTGAGGATGGGCGCACCCTCTCGGACTACAAC 15844 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 || || ||||| || || || ||| | || |||| Sbjct 15843 ATCCAGAAGGAGTCCACCCTCCACCTTGTCCTGCG 15809 >seq561 Length=237278 Score = 98.7 bits (108), Expect = 9e-16 Identities = 149/211 (71%), Gaps = 1/211 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || | ||||| || || || || || || || || | || Sbjct 98313 ATGCAGATCTTTGTCAAGACCTTGACCGGCAAGACCATCACCCTTGAGGTCGAGTCGTCC 98254 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| || || || || || || || Sbjct 98253 GACACCATCGACAATGTCAAGGCGAAGATCCAGGACAAGGAGGGCATTCCCCCGGACCAG 98194 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| | ||||| || || || ||||| |||||| | | | |||| || || ||| Sbjct 98193 CAGCGTCTCATCTTCGCTGGAAAGCAGCTTGAGGATGGTCGCACCTTGTCCGACTACAAC 98134 Query 24884 ATTCAAAAGGAATCGACACTACA-CTTGGTG 24913 || || ||||| ||||| || || ||||||| Sbjct 98133 ATCCAGAAGGAGTCGACCCTTCACCTTGGTG 98103 Score = 96.9 bits (106), Expect = 3e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || ||||| || || || ||||| || || | || Sbjct 98032 ATGCAGATCTTCGTCAAGACCCTGACGGGTAAGACGATCACCCTCGAGGTCGAGTCGTCC 97973 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || ||||| || ||||| || || || ||||| ||||| Sbjct 97972 GACACCATCGACAACGTCAAGGCGAAGATTCAGGACAAGGAGGGTATCCCTCCGGATCAG 97913 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || ||||||| || || || ||||| ||||| | | | || || || ||| Sbjct 97912 CAGCGCCTGATCTTCGCGGGCAAGCAGCTCGAGGACGGCCGCACTCTTTCGGACTACAAC 97853 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 || || ||||| ||||| || ||| | ||| | || |||| || ||| Sbjct 97852 ATCCAGAAGGAGTCGACCCTCCACCTCGTGCTCCGTCTGCGTGGCGGC 97805 Score = 87.8 bits (96), Expect = 2e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || ||||| || || || || || ||||| || || || || | Sbjct 97804 ATGCAGATCTTCGTCAAGACGCTGACGGGCAAGACGATCACGCTGGAGGTTGAGTCCTCG 97745 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| || || || || ||||| || Sbjct 97744 GACACGATCGACAACGTGAAGGCGAAGATCCAGGACAAGGAGGGGATCCCGCCCGACCAG 97685 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || || ||||||| ||||| || ||| ||||||| | | | || || || ||| Sbjct 97684 CAGCGCCTGATCTTCGCCGGCAAGCAGTTGGAGGACGGCCGCACGCTCTCGGACTACAAC 97625 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 || || ||||| || || ||| | || |||| | ||||| ||| Sbjct 97624 ATCCAGAAGGAGAGCACGCTCCACCTTGTCCTGCGTCTCCGCGGTGGC 97577 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449887865340680