Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20pubescens_20[genbank_20GCA_5F001895945.1_202016-12-09] 1,731 sequences; 39,739,821 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq1532 205 1e-46 seq865 122 1e-21 seq827 111 2e-18 seq98 105 1e-16 seq624 87.8 3e-11 seq1142 86.0 1e-10 >seq1532 Length=168184 Score = 205 bits (226), Expect = 1e-46 Identities = 242/327 (74%), Gaps = 3/327 (1%) Strand=Plus/Plus Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400 || |||||||| ||||| | ||||| || | ||| |||||||| ||||||||| Sbjct 153046 CCCTCGTCGCGGCTGATGAGCTCGTTCGAGAACGTCAAGCCCGGCATGAGTCCGCGCTTC 153105 Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460 |||||||| |||||||| ||| ||| ||||| |||||||||||||||||||| || Sbjct 153106 TTGAGCCAGAAGATGGCGGCGAAGGAGCCGGAGAAGAAGATGCCCTCGACGGCGGCGAAC 153165 Query 794461 CCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCAC 794520 |||||||||||||||| || | | || ||| | |||||| || |||||| Sbjct 153166 GCGACGAGCCGCTCGGCGAA---GACGGAGCGCTCGTCTGCGATCCAGCGCAACGCCCAG 153222 Query 794521 TCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTCTCG 794580 |||||||| ||| | | | || | |||||||| ||| ||||||| | | || Sbjct 153223 TCTGCCTTCTTCTTGATGCACGGAATGGTGTCGATCGCGTCGAAGAGGTAGGCGCGTTCT 153282 Query 794581 ACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTCG 794640 | ||||| || |||||||||||||||||||||||| ||||| ||||| | |||||| Sbjct 153283 GCGGGGTCGCGGATGTAGGTGTCGATGAGGAGCGAGTATGTCTCGGAGTGTACGTTTTCC 153342 Query 794641 ATGGCGATCTGGAAGCCATAAAAGCAG 794667 || ||| |||||||| || |||||| Sbjct 153343 ATCATGATTTGGAAGCCGTAGAAGCAG 153369 Score = 205 bits (226), Expect = 1e-46 Identities = 243/328 (74%), Gaps = 5/328 (2%) Strand=Plus/Minus Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400 |||||||||||| ||||| |||||| ||| ||| || ||||| | ||| |||||| Sbjct 155473 CCTTCGTCGCGAGAGATCAGCTCGTTGGAGAAGGTGAGCCCAGGCATCAAGCCACGCTTC 155414 Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460 |||||||| ||||||| |||| ||| ||||| |||||||||||||| ||||| ||| Sbjct 155413 TTGAGCCAGAAGATGGAGGCGAAAGAGCCGGAGAAGAAGATGCCCTCGACAGCGGCGAAG 155354 Query 794461 CCGACGAGCCGCTCGGCAAAAGTGTCCAGGC-CCTCTTTGTTGATCCACTTCATCGCCCA 794519 | | ||| ||||| | || | ||| | ||| | | |||||| || ||||| Sbjct 155353 GCAATGAGACGCTCAGAGAACG----CAGACTCCTTGTCGGAGATCCAGCGCAGGGCCCA 155298 Query 794520 CTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTCTC 794579 || ||||| ||| | | | || | || ||||| || || ||| | || ||| Sbjct 155297 GTCGGCCTTCTTCTTGATGCAAGGAATGGTATCGATAGCATCGAACAGGCGTTCGCGCTC 155238 Query 794580 GACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTC 794639 |||||||||| |||||||||||||||||||||||||||||| ||||||||||| || Sbjct 155237 CTGGGGGTCCTTGATGTAGGTGTCGATGAGGAGCGAGTAGGTCTCGGAGTGGATGTTCTC 155178 Query 794640 GATGGCGATCTGGAAGCCATAAAAGCAG 794667 || ||||||||||||||| |||||| Sbjct 155177 CATCATGATCTGGAAGCCATAGAAGCAG 155150 Score = 170 bits (188), Expect = 3e-36 Identities = 162/207 (78%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 793892 GACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAG 793951 || ||||||| ||| |||||| ||||||| |||||| ||||| |||||||| ||| Sbjct 152671 GAAGCCCGCCATGGAGTACTCGGACACGCGCTTCTCGAAGAAGTTCGTCTTGCCGGTGAG 152730 Query 793952 CGAGATCAACTCCATCCACGGGAACGGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGAG 794011 |||||||| ||||| | ||||||||| | || ||||||||||||||| ||||| Sbjct 152731 CGAGATCATGTCCATGAAGTCGAACGGGTTCGTCGCGCGGTAGTGCTTCTCGCTGCCGAG 152790 Query 794012 CGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCAT 794071 || | ||||| ||||| |||||||| || |||||||||||||| || |||||||||| Sbjct 152791 CGCGACGAGCAGCCGGTCTGCGACGAACTCGATGTACTGGCACATCAGCTCGGCGTTCAT 152850 Query 794072 GCCGATGAGCGCCACGGGCAGCGACTC 794098 |||||| || | || ||||| | ||| Sbjct 152851 GCCGATCAGAGAGACAGGCAGAGCCTC 152877 Score = 136 bits (150), Expect = 6e-26 Identities = 147/193 (76%), Gaps = 4/193 (2%) Strand=Plus/Minus Query 793893 ACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGC 793952 || |||||||| | || ||| ||||||| |||||| ||||| || ||||||| |||| Sbjct 155845 ACACCCGCCTTCGAGTAGTCGGACACGCGCTTCTCGAAGAAGTTCGTTTTGCCCTGGAGC 155786 Query 793953 GAGATCAACTCCATCCACGGGAACGGGTTGGC--CGTCAGGTAGTGCTTCTCGCACCCGA 794010 ||||||| ||||| | ||| ||||| | ||| |||| |||||| | |||| Sbjct 155785 GAGATCATGTCCATGAAGTCGAAAGGGTTCGTGACGTT--GTAGAACTTCTCTCCGCCGA 155728 Query 794011 GCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTACTGGCACATGAGGGCGGCGTTCA 794070 ||| | || || ||||| || ||||| || |||||||||| |||||| | |||||||| Sbjct 155727 GCGCAACCAGTAGACGGTCAGCAACGAACTCGATGTACTGGCGCATGAGCGTGGCGTTCA 155668 Query 794071 TGCCGATGAGCGC 794083 ||||||||||||| Sbjct 155667 TGCCGATGAGCGC 155655 Score = 120 bits (132), Expect = 5e-21 Identities = 148/200 (74%), Gaps = 3/200 (2%) Strand=Plus/Minus Query 796160 CTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCCGTCGCTGGCGG 796219 |||||||||| || ||| || || | || ||||| ||||||||||| ||||| Sbjct 155136 CTTGGACCTCGTTGGAGAACCGCTCGACGAGATTCTCGTTGACGATGCCGTCCGAGGCGG 155077 Query 796220 CGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGAG-CG--AGACCC 796276 |||| || ||||| |||||| || ||||| |||||||| | | |||| || | || Sbjct 155076 CGAAGAACGCGAGAACGTGCGAGACGAAGTGGCGCTCGTCATTGGTGAGACGGTTGTTCC 155017 Query 796277 AGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGAGGCCTCGGCCT 796336 ||| | | |||| | ||| || | |||||| |||||||||||||| ||||| |||| Sbjct 155016 AGTCGTGCATGTCCTTGGAGAGATCCATCTCCTCCGCGGTCCAAAAGGACGCCTCAGCCT 154957 Query 796337 TTTTGTACATCTCCCATATC 796356 | |||||||||| ||| ||| Sbjct 154956 TCTTGTACATCTGCCAAATC 154937 >seq865 Length=134895 Score = 122 bits (134), Expect = 1e-21 Identities = 148/197 (75%), Gaps = 6/197 (3%) Strand=Plus/Plus Query 2070050 CCGCCGCATGGTAGATCGTCTCAAAGATGGTGC-GGTTGAGGCGACGCGCGCCGGCGCTC 2070108 |||||||||||||||| ||||| ||||| ||| ||||||| ||||| | ||| Sbjct 113549 CCGCCGCATGGTAGATGGTCTCGAAGATC-TGCTGGTTGAGCTTGCGCGCCTCAACGCCA 113607 Query 2070109 TCCCACGGCAGGTCCATCATGGCA--AACGCGTCGGCCAGGCCCTGCACGCCGACGCCCA 2070166 || | |||| ||| | || ||||| || |||| ||| |||||||| || || | Sbjct 113608 TCGAAGGGCA--TCCGAAGCGCCATGAACGCATCCGCCAAGCCTTGCACGCCCACACCGA 113665 Query 2070167 TCGGCCGGTGGCGCAGGTTCGAGTGCCGGGCCTCGGGCACCGGGTAGTGGTTGATGTCGA 2070226 | || |||||||||| ||| || | |||||||||| | ||||||||||||| ||||| Sbjct 113666 TGGGACGGTGGCGCATGTTTGAACGTTGGGCCTCGGGAATGGGGTAGTGGTTGACGTCGA 113725 Query 2070227 TCACGCGGTTGAGGTTG 2070243 | | ||||||||||||| Sbjct 113726 TGATGCGGTTGAGGTTG 113742 Score = 87.8 bits (96), Expect = 3e-11 Identities = 96/128 (75%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 2071877 TCCACAGGCCGTAAAAGAGATCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTTTCA 2071936 |||| || |||| || |||||||| || ||| ||||| |||||||||||||| || Sbjct 114266 TCCAGAGCGCGTAGAACAGATCGCGGGCACGGACTTCCTCTTTGCCGTGGTTCTTGCGCA 114325 Query 2071937 GGTCGAGCCAGTCGACGAGGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGCCCT 2071996 | || | | |||| || |||||||||||| ||||| |||||| ||| || || || Sbjct 114326 GATCAATGAACTCGAAGACGTCGGCGTGCCAGGGCTCAAGGTAGATGGCGAATGCTCCGG 114385 Query 2071997 TGCGCTTG 2072004 ||||||| Sbjct 114386 GGCGCTTG 114393 >seq827 Length=87468 Score = 111 bits (122), Expect = 2e-18 Identities = 200/289 (69%), Gaps = 5/289 (2%) Strand=Plus/Minus Query 2175077 GCCGTCGGTGCCGTTTTTAAACCCGACCGGCAACGGCAGCGCCGACGCCATTTCGCGGTG 2175136 |||||| |||||||| || ||||| | || |||| || ||||||| | ||||| || Sbjct 49043 GCCGTCCGTGCCGTTCTTGAACCCAATGGGGAACGACACGCCCGACGCAAGCTCGCGATG 48984 Query 2175137 CACCTGGCTCTCGGTGGTGCGCGCGCCCACGGCGCCCCACGCCACGAGGTCTGCCAAATA 2175196 | |||||||||||| ||||||||||| | ||||||||||| | |||||| || | || Sbjct 48983 GAGCTGGCTCTCGGTCGTGCGCGCGCCGATGGCGCCCCACGAGATGAGGTCGGCGATGTA 48924 Query 2175197 GGGCGCCACCAAAGGGCTGAGAAACTCGACAGCC-ACGGGCTGGCCGACGTCGACGACCA 2175255 | | | | | | ||| | ||| |||| ||||| ||| | | || | | Sbjct 48923 CTGGGGCGAGATGGTGTCGAGGAGTTCG-GAGCCGACGGGGACGCCCATGGCGGTG---A 48868 Query 2175256 GGTCGCGCAGCAGTCGACGCGATGTGGCGAGGCCGGCGGCCAGGCGGCACGACCCGTCGA 2175315 |||||| || || | || | | | ||||| | | |||| | || ||||||| Sbjct 48867 GGTCGCAGAGGAGCTGGCGGGCGAGGCCCAGGCCCTTGTTGATGCGGAAGGAGCCGTCGA 48808 Query 2175316 GGTCGGGGTCGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTT 2175364 ||| |||||| || ||||||||||| ||||| ||||| ||||| || Sbjct 48807 TGTCCGGGTCGTTGATGAGGCCCTTCCAGCCGACCGTCGTCCGCGGTTT 48759 >seq98 Length=58422 Score = 105 bits (116), Expect = 1e-16 Identities = 84/101 (83%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 1485604 GCCTCGGTGCCGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGATCGACATCGAT 1485663 |||||||| ||||||| |||| ||||||||||| |||||||| | ||| | ||||| Sbjct 28546 GCCTCGGTCGCGATGCGCTCGAAGATGTCGTTGACGAACGAGTTGAGGATGGCCATCGCC 28605 Query 1485664 TTGTTGGAGATGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704 ||||||||||| || ||| |||||||||||||||||||| Sbjct 28606 TTGTTGGAGATACCGGTGTCAGGGTGCACCTGCTTGAGCAC 28646 >seq624 Length=157630 Score = 87.8 bits (96), Expect = 3e-11 Identities = 74/91 (81%), Gaps = 0/91 (0%) Strand=Plus/Minus Query 1485614 CGATGCGGTCGATCATGTCGTTGACAAACGAGTTCATGATCGACATCGATTTGTTGGAGA 1485673 ||||||| |||| || |||||||| || ||||| | ||| | ||||| |||||||||| Sbjct 20852 CGATGCGCTCGAAGATATCGTTGACGAAGGAGTTGAGGATAGCCATCGCCTTGTTGGAGA 20793 Query 1485674 TGCCCACGTCGGGGTGCACCTGCTTGAGCAC 1485704 | ||| ||||||||| ||||||||||| || Sbjct 20792 TACCCGTGTCGGGGTGGACCTGCTTGAGGAC 20762 >seq1142 Length=134542 Score = 86.0 bits (94), Expect = 1e-10 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 431022 CCCGAGAGCCGCGGCTTTGTGCGCAACTCGTACGAGCGCGGCCTCAACTCGCGCGAGATG 431081 |||||| |||||||| || ||||||||| ||| || |||| | | ||| | Sbjct 58855 CCCGAGGCTCGCGGCTTCGTCGAGAACTCGTACTTGCGAGGACTCACTCCCCAGGAGTTC 58914 Query 431082 TTTCTGCACATGATCGGCGGGCGCGAGGGTCTCGTCGACACGGCCGTCAAGACGGCCGAG 431141 || | ||| ||| | || ||||| |||||| |||| ||||| |||||||| ||||| Sbjct 58915 TTCTTCCACGCGATGGCTGGTCGCGAAGGTCTCATCGATACGGCTGTCAAGACCGCCGAA 58974 Query 431142 ACGGGCTACATCCAGCGTCG 431161 ||||| || ||||||||||| Sbjct 58975 ACGGGTTATATCCAGCGTCG 58994 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916062265634909