Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20pubescens_20[genbank_20GCA_5F001895945.1_202016-12-09] 1,731 sequences; 39,739,821 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq1277 143 2e-29 seq561 143 2e-29 >seq1277 Length=70460 Score = 143 bits (158), Expect = 2e-29 Identities = 164/218 (75%), Gaps = 8/218 (4%) Strand=Plus/Plus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 |||||| ||||| | |||| ||||||||| ||||| |||||||| ||| ||||| |||| Sbjct 15811 CAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGCCCATC 15870 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 || || ||||| ||||||||||| || |||||||| ||| | || | ||||||||||| Sbjct 15871 CTCAAGCTGCTTGCCGGCGAAGATGAGACGTTGCTGATCTGGGGGGATGCCCTCCTTGTC 15930 Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTA 34940 | || || || || || | ||||| || | ||| || || | ||| | Sbjct 15931 CTGGATCTTCGCCTTCAC--AT--TGTCGATGGTGTCCGACGACTCAACCTCGAGGGTGA 15986 Query 34941 TGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 | ||||| |||||||||||||| || |||||||||||| Sbjct 15987 TCGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCATG 16024 Score = 131 bits (144), Expect = 1e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||| ||||||| ||| ||||||||| ||||| || ||||| || |||| | || Sbjct 15304 AGGACGAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCCGACAGAGTGCGTCCGTCC 15363 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 |||| ||||| ||||||||||||| || ||||||||| | || | ||||||||||| Sbjct 15364 TCCAACTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGGGGAATACCCTCCTTGTCT 15423 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | |||| || | |||||| || | ||| |||||| Sbjct 15424 TGGATCTTCGCCTTGACGTTGTCGATCGTGTCGGAAGACTCGACCTCGAGGGTAATGGTC 15483 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || ||||| | ||||| || ||||||||||| Sbjct 15484 TTCCCCGTCAACGTCTTGACGAAGATCTGCAT 15515 Score = 102 bits (112), Expect = 5e-17 Identities = 146/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 34772 AGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGT 34831 ||||||| ||| ||||||||||||||| |||||||| | | | |||| || || Sbjct 15590 AGGTGAAGGGTAGACTCCTTCTGAATGTTGTAGTCCGACAACGTCCTGCCATCCTCGAGC 15649 Query 34832 TGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATT 34891 ||||| || |||||||||| || |||||||| |||| | ||||||||||| | || Sbjct 15650 TGCTTGCCAGCGAAGATCAAACGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGGATC 15709 Query 34892 TTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCC 34951 || || ||| | || | || | ||| || || | ||| |||||||| || Sbjct 15710 TTCGCCTTCACGTTGTCGATGGTATCGGAAGACTCAACCTCGAGGGTAATGGTCTTGCCG 15769 Query 34952 GTGAGGGTCTTTACAAAGATCTGCAT 34977 || | ||||| || ||||||||||| Sbjct 15770 GTCAACGTCTTCACGAAGATCTGCAT 15795 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 34770 CCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCA 34829 ||||||| | || ||||||||| ||||| ||||| || || |||| | || |||| Sbjct 15080 CCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGCGTGCGGCCGTCCTCCA 15139 Query 34830 GTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTA 34889 ||||| || || ||||| || || |||||||| | || | |||||||| || | | Sbjct 15140 ACTGCTTCCCAGCAAAGATGAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTATCCTGAA 15199 Query 34890 TTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTC 34949 | || || ||| | |||| || || ||| || || | || || ||||| | Sbjct 15200 TCTTCGCCTTCACGTTGTCGATCGTGTCGGAGGACTCCACCTCCAGCGTGATCGTCTTCC 15259 Query 34950 CCGTGAGGGTCTTTACAAAGATCTGCATG 34978 | ||||| ||||| || |||||||||||| Sbjct 15260 CGGTGAGCGTCTTGACGAAGATCTGCATG 15288 >seq561 Length=237278 Score = 143 bits (158), Expect = 2e-29 Identities = 160/214 (75%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 |||||| ||||| | |||||||||||||| ||||| |||||||| || |||| | || Sbjct 97592 CAGGACAAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGGCCGTC 97651 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 |||| ||||| |||||||||||||| || |||||||| |||| | |||||||||||| Sbjct 97652 CTCCAACTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGCGGGATCCCCTCCTTGTC 97711 Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944 | || || || ||| | |||| || || ||| || || | || || || Sbjct 97712 CTGGATCTTCGCCTTCACGTTGTCGATCGTGTCCGAGGACTCAACCTCCAGCGTGATCGT 97771 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 ||| ||||| || ||||| || |||||||||||| Sbjct 97772 CTTGCCCGTCAGCGTCTTGACGAAGATCTGCATG 97805 Score = 125 bits (138), Expect = 5e-24 Identities = 155/210 (74%), Gaps = 8/210 (4%) Strand=Plus/Plus Query 34772 AGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGT 34831 ||||||| ||| ||||||||| ||||| ||||| || | | |||| |||| || || Sbjct 98108 AGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAAGGTGCGACCATCCTCAAGC 98167 Query 34832 TGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATT 34891 |||||||| |||||||| || || |||||||| | || | ||||||||||| | || Sbjct 98168 TGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATC 98227 Query 34892 TTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTATGGTCTT 34947 || ||||| || | ||||| || | |||||| |||| ||| |||||||| Sbjct 98228 TTCGCCTTGAC--AT--TGTCGATGGTGTCGGACGACTCGACCTCAAGGGTGATGGTCTT 98283 Query 34948 TCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || | |||||| |||||||||||||| Sbjct 98284 GCCGGTCAAGGTCTTGACAAAGATCTGCAT 98313 Score = 116 bits (128), Expect = 2e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || || ||||| | ||| ||||||||| ||||| |||||||| || |||| | || Sbjct 97821 AGCACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCGTCC 97880 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| || ||||||||||| || ||||| || | || | ||||||||||| Sbjct 97881 TCGAGCTGCTTGCCCGCGAAGATCAGGCGCTGCTGATCCGGAGGGATACCCTCCTTGTCC 97940 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || |||||| | || | || | |||||| || | ||| || ||| Sbjct 97941 TGAATCTTCGCCTTGACGTTGTCGATGGTGTCGGACGACTCGACCTCGAGGGTGATCGTC 98000 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || ||||| |||||||| || ||||||||||| Sbjct 98001 TTACCCGTCAGGGTCTTGACGAAGATCTGCAT 98032 Score = 93.3 bits (102), Expect = 3e-14 Identities = 149/214 (70%), Gaps = 0/214 (0%) Strand=Plus/Plus Query 34765 CAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATC 34824 || ||| ||||| | |||||||||||||| ||||| || ||||| || |||| | || Sbjct 95761 CATGACGAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAATCCGAGAGCGTGCGGCCGTC 95820 Query 34825 GTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34884 ||||| |||| ||||||||| || || || ||||| ||| | | |||||||||| Sbjct 95821 CTCCAGCGGCTTGTTGGCGAAGATGAGACGCTGTTGGTCGGACGGGATCGCCTCCTTGTC 95880 Query 34885 GTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGT 34944 | || || || ||| | |||| || | || ||| || | || || || Sbjct 95881 CTGGATCTTCGCCTTCACGCTGCCGATCGTGTCCGATGGCTTGACCTCCAAGGGGATCGT 95940 Query 34945 CTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || ||| |||||||||| || || || |||||| Sbjct 95941 CTGACCCATGAGGGTCTTGACGAATATTTGCATG 95974 Score = 86.0 bits (94), Expect = 4e-12 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 34772 AGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGT 34831 ||||| | |||| ||||||||||||||| ||||| || || ||||| | || || || Sbjct 98388 AGGTGCAGGGTGGACTCCTTCTGAATGTTGTAGTCAGAGAGCGTGCGCCCGTCCTCGAGC 98447 Query 34832 TGCTTTCCGGCGAAGATCAGTCGTTGCTGGTC 34863 ||||| ||||||||||| || || |||||||| Sbjct 98448 TGCTTCCCGGCGAAGATAAGACGCTGCTGGTC 98479 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325685929001489