Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20pubescens_20[genbank_20GCA_5F001895945.1_202016-12-09] 1,731 sequences; 39,739,821 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq1277 86.0 5e-12 >seq1277 Length=70460 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || || || || || || || ||||| ||||||||| |||| ||| || | Sbjct 15795 ATGCAGATCTTCGTGAAGACGTTGACCGGCAAGACCATTACCCTCGAGGTTGAGTCTTCC 15736 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 ||||| ||| | | || || ||||| || || || ||| | || || ||| Sbjct 15735 GATACCATCGACAACGTGAAGGCGAAGATCCAGGACAAGGAGGGCATCCCGCCCGACCAG 15676 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||| | | || | || || || ||||| ||||| | || || || ||||||||||| Sbjct 15675 CAGCGTTTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCAGGACGTTGTCGGACTACAAC 15616 Query 107736 ATTCAAAAGGAGTCTAC 107752 ||||| ||||||||||| Sbjct 15615 ATTCAGAAGGAGTCTAC 15599 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398868385070659