Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20pubescens_20[genbank_20GCA_5F001895945.1_202016-12-09] 1,731 sequences; 39,739,821 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq865 100 3e-16 >seq865 Length=134895 Score = 100 bits (110), Expect = 3e-16 Identities = 251/376 (67%), Gaps = 4/376 (1%) Strand=Plus/Plus Query 146941 CTAGTGAAAGGCTCAAAAGACTCATTATTGCCTAATATTTGGGCCGTGGTTGCGGTAGGC 147000 || ||| ||||||| || |||| || ||||| || || || ||| | ||||||||| Sbjct 113302 CTCGTGTAAGGCTCGAAGCACTCGTTGTTGCCCAAGATCTGACTCGTCGAGGCGGTAGGC 113361 Query 147001 ATGTACGCCACCAACAATGAATTTCGCAGACCGTAC-GCACGGATGTTGTCCTTCAAAGT 147059 || || || | ||| ||||| || ||||||| | || | | || |||| | | Sbjct 113362 ATCGGGGCAACAAGCAACGAATTACGGAGACCGTGCTGCGC-AACCTTCGCCTTGAGGCT 113420 Query 147060 TTGCCAGTCCCACATCGACGAGGGCGTCACGTTCCACATGTCGTACTGGAGC-ACTCCTC 147118 ||||||||| | || || || | | ||| | ||||||||||||| |||| Sbjct 113421 CGTCCAGTCCCAGAGGTCCGTAGGAGTGATGCCCCAGAGGTCGTACTGGAGCTTGCCCTC 113480 Query 147119 GACTGGCGGGACTGCCAGCGAACGTAGTGTAGCTTCCGTCGCGCTGCGCCAATTCACAGC 147178 | |||||| ||||| | |||| |||| | ||| |||| |||| || |||| Sbjct 113481 G-GAGGCGGGGCTGCCCTGGTACGTCTCGTAGGTCCCGAACTGCTGTGCCATCTCGCAGC 113539 Query 147179 TTGCCTCGAGCGCTCCATAGTATATGGTTTCGGCGATTTGTTTGTTTAGGACGGTCGCTT 147238 | ||||||| ||| ||| ||| ||||| ||| ||| || | ||| || | ||| | Sbjct 113540 TCGCCTCGACCGCCGCATGGTAGATGGTCTCGAAGATCTGCTGGTTGAGCTTGCGCGCCT 113599 Query 147239 CTTCGCTCTCGTAAGGCATACGCAGAAGCACAAAGGCATCGGCCAAACCCTGGATACCGA 147298 | ||| ||| | ||||| || || || || ||||| ||||| || || | || | Sbjct 113600 CAACGCCATCGAAGGGCATCCGAAGCGCCATGAACGCATCCGCCAAGCCTTGCACGCCCA 113659 Query 147299 CGCCGATAGGTCGATG 147314 | ||||| || || || Sbjct 113660 CACCGATGGGACGGTG 113675 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476600887325160