Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20pubescens_20[genbank_20GCA_5F001895945.1_202016-12-09] 1,731 sequences; 39,739,821 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq1277 82.4 5e-11 >seq1277 Length=70460 Score = 82.4 bits (90), Expect = 5e-11 Identities = 99/135 (73%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942 ||||| || ||| |||| || ||||| || || || || ||||| || || ||||| Sbjct 15422 GACAAGGAGGGTATTCCCCCAGACCAGCAGCGCTTGATCTTCGCCGGCAAGCAGTTGGAG 15363 Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002 |||| ||||| |||| |||||||||||||| || ||| |||| | || | || | Sbjct 15362 GACGGACGCACTCTGTCGGATTACAACATCCAGAAGGAGTCCACTCTTCACCTCGTCCTT 15303 Query 28003 CGTTTGCGTGGCGGC 28017 ||| |||| |||||| Sbjct 15302 CGTCTGCGCGGCGGC 15288 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355854892526637