Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20pubescens_20[genbank_20GCA_5F001895945.1_202016-12-09] 1,731 sequences; 39,739,821 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq1277 197 3e-45 seq561 176 1e-38 seq318 93.3 1e-13 >seq1277 Length=70460 Score = 197 bits (218), Expect = 3e-45 Identities = 177/222 (80%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | ||||||||||| || |||||||| || |||||||| || |||| ||||| Sbjct 15802 ACGAAGGCGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGGGT 15861 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | ||||| || ||||||||||| |||||||| || ||||| || || || || | || Sbjct 15862 GCGCCCATCCTCAAGCTGCTTGCCGGCGAAGATGAGACGTTGCTGATCTGGGGGGATGCC 15921 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||||||||||||||||| ||||| || ||||||||||| || ||||||||||| Sbjct 15922 CTCCTTGTCCTGGATCTTCGCCTTCACATTGTCGATGGTGTCCGACGACTCAACCTCGAG 15981 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||||||||| |||||||| ||||| || || | |||||| Sbjct 15982 GGTGATCGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 16023 Score = 170 bits (188), Expect = 4e-37 Identities = 165/212 (78%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| ||||||||||||||||| || |||||||| ||||||| || || | ||| || Sbjct 15304 AGGACGAGGTGAAGAGTGGACTCCTTCTGGATGTTGTAATCCGACAGAGTGCGTCCGTCC 15363 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||| ||||||||| |||||||| | ||| || ||||| || |||| || |||||||| Sbjct 15364 TCCAACTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCTGGGGGAATACCCTCCTTGTCT 15423 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || ||||| ||||| ||||| || || |||||||| || || ||| Sbjct 15424 TGGATCTTCGCCTTGACGTTGTCGATCGTGTCGGAAGACTCGACCTCGAGGGTAATGGTC 15483 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| | ||||| || || | |||||| Sbjct 15484 TTCCCCGTCAACGTCTTGACGAAGATCTGCAT 15515 Score = 154 bits (170), Expect = 3e-32 Identities = 159/208 (76%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 210907 CAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCA 210966 |||||||||| || ||||| || || ||||| || |||| | ||||| ||||| || | Sbjct 15588 CAAGGTGAAGGGTAGACTCCTTCTGAATGTTGTAGTCCGACAACGTCCTGCCATCCTCGA 15647 Query 210967 GCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGA 211026 |||||||||| |||||||| | || || ||||| || || | || ||||||||||||| Sbjct 15648 GCTGCTTGCCAGCGAAGATCAAACGCTGCTGGTCGGGCGGGATGCCCTCCTTGTCCTGGA 15707 Query 211027 TCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTC 211086 |||| |||||||| |||||||| || || ||||||||||| || || ||||| | Sbjct 15708 TCTTCGCCTTCACGTTGTCGATGGTATCGGAAGACTCAACCTCGAGGGTAATGGTCTTGC 15767 Query 211087 CCGTGAGAGTCTTTACAAACACCTGCAT 211114 | || | ||||| || || | |||||| Sbjct 15768 CGGTCAACGTCTTCACGAAGATCTGCAT 15795 Score = 141 bits (156), Expect = 2e-28 Identities = 155/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 210909 AGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGC 210968 ||||| || || ||||| || |||||||| || || | || || | || || |||| | Sbjct 15082 AGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAGAGCGTGCGGCCGTCCTCCAAC 15141 Query 210969 TGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATC 211028 ||||| || || ||||| || || || ||||| ||||| | || ||||| ||||| ||| Sbjct 15142 TGCTTCCCAGCAAAGATGAGACGCTGCTGGTCGGGAGGGATGCCCTCCTTATCCTGAATC 15201 Query 211029 TTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCC 211088 || |||||||| ||||| ||||| ||| || ||||| || ||||||||||| || Sbjct 15202 TTCGCCTTCACGTTGTCGATCGTGTCGGAGGACTCCACCTCCAGCGTGATCGTCTTCCCG 15261 Query 211089 GTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| ||||| || || | |||||| Sbjct 15262 GTGAGCGTCTTGACGAAGATCTGCAT 15287 Score = 109 bits (120), Expect = 1e-18 Identities = 87/105 (83%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070 || ||||||||||||||||| || ||||| ||||||||||||||| || |||||| Sbjct 16202 CCCTCCTTGTCCTGGATCTTGGCCTTAACGTTGTCGATGGTGTCAGAGGACTCGACCTCG 16261 Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 |||||||| ||||| || ||||||||||| || || | ||||||| Sbjct 16262 AGAGTGATGGTCTTGCCAGTGAGAGTCTTAACGAAGATCTGCATT 16306 Score = 87.8 bits (96), Expect = 4e-12 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 210894 CGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTC 210953 ||||| | || || || || || |||||||| || |||||||| || |||| |||||| Sbjct 16031 CGAAGACGGAGAACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTA 16090 Query 210954 CTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGG 211006 | || || || ||||||||||| || ||||| ||||| || ||||| || || Sbjct 16091 CGGCCGTCCTCGAGCTGCTTGCCCGCAAAGATCAGGCGCTGCTGGTCGGGCGG 16143 >seq561 Length=237278 Score = 176 bits (194), Expect = 1e-38 Identities = 166/212 (78%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||||||||| || ||| ||| || |||||||| || |||| || || | || || Sbjct 97593 AGGACAAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGGCCGTCC 97652 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||| ||||||||| |||||||| ||||| || ||||| || || | || ||||||||| Sbjct 97653 TCCAACTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGCGGGATCCCCTCCTTGTCC 97712 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| |||||||| ||||| ||||| ||| |||||||| || ||||||||| Sbjct 97713 TGGATCTTCGCCTTCACGTTGTCGATCGTGTCCGAGGACTCAACCTCCAGCGTGATCGTC 97772 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| || ||||| || || | |||||| Sbjct 97773 TTGCCCGTCAGCGTCTTGACGAAGATCTGCAT 97804 Score = 167 bits (184), Expect = 5e-36 Identities = 164/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||| || || ||||| || |||||||| || |||| ||| || | || || Sbjct 97821 AGCACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGAGTGCGGCCGTCC 97880 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||| ||||| || || || ||||| | || ||||||||| Sbjct 97881 TCGAGCTGCTTGCCCGCGAAGATCAGGCGCTGCTGATCCGGAGGGATACCCTCCTTGTCC 97940 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| || ||||| ||||||||||| || || |||||||| ||||||||| Sbjct 97941 TGAATCTTCGCCTTGACGTTGTCGATGGTGTCGGACGACTCGACCTCGAGGGTGATCGTC 98000 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| || ||||| || || | |||||| Sbjct 98001 TTACCCGTCAGGGTCTTGACGAAGATCTGCAT 98032 Score = 150 bits (166), Expect = 4e-31 Identities = 158/208 (76%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 210907 CAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCA 210966 |||||||||| || ||||| || |||||||| || || | | ||| | ||||| || | Sbjct 98106 CAAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAAGGTGCGACCATCCTCAA 98165 Query 210967 GCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGA 211026 ||||||| || |||||||| || || || ||||| || |||| || ||||||||||||| Sbjct 98166 GCTGCTTTCCAGCGAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGA 98225 Query 211027 TCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTC 211086 |||| || || || ||||||||||| || || ||||| || ||||| ||||| | Sbjct 98226 TCTTCGCCTTGACATTGTCGATGGTGTCGGACGACTCGACCTCAAGGGTGATGGTCTTGC 98285 Query 211087 CCGTGAGAGTCTTTACAAACACCTGCAT 211114 | || | ||||| ||||| | |||||| Sbjct 98286 CGGTCAAGGTCTTGACAAAGATCTGCAT 98313 Score = 118 bits (130), Expect = 2e-21 Identities = 158/214 (74%), Gaps = 8/214 (4%) Strand=Plus/Plus Query 210905 GACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTC 210964 ||| ||||| || ||| ||| || |||||||| ||||||| || || | || || || Sbjct 95764 GACGAGGTGGAGCGTGCTCTCCTTCTGGATGTTGTAATCCGAGAGCGTGCGGCCGTCCTC 95823 Query 210965 CAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGA--GGAACTCCTTCCTTGTCC 211022 |||| ||||| |||||||| || || |||||||| ||| ||| | ||| |||||||| Sbjct 95824 CAGCGGCTTGTTGGCGAAGATGAGACGCTGTTGGTC-GGACGGGATCGCCT-CCTTGTCC 95881 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGA--GCTTTCAACCTCGAGAGTGATCG 211080 |||||||| |||||| | |||| ||||| || |||| ||||| | | ||||| Sbjct 95882 TGGATCTTCGCCTTCACGCTGCCGATCGTGTCCGATGGCTT--GACCTCCAAGGGGATCG 95939 Query 211081 TCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||| ||| |||| ||||| || || | ||||| Sbjct 95940 TCTGACCCATGAGGGTCTTGACGAATATTTGCAT 95973 Score = 104 bits (114), Expect = 5e-17 Identities = 146/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 210907 CAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCA 210966 ||| ||| || || ||||| || |||||||| || || | | || | |||||||| | Sbjct 92832 CAATGTGCAGGGTCGACTCCTTCTGGATGTTGTAGTCGGACAAAGTTCGGCCATCTTCGA 92891 Query 210967 GCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGA 211026 |||||||||| |||||||| || || || || || | | || |||||||| || | Sbjct 92892 GCTGCTTGCCAGCGAAGATGAGACGCTGGGTGTTTGGCGCAGTGCCCTCCTTGTCATGAA 92951 Query 211027 TCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTC 211086 ||||| |||||||||||||| ||||| || |||| || ||||| ||||| | Sbjct 92952 TCTTTGCCTTCACGTTTTCGATAGTGTCGGACGACAGGGCCTCCAGGGTGATGGTCTTGC 93011 Query 211087 CCGTGAGAGTCTTTACAAACACCTG 211111 | || | ||||| || || | ||| Sbjct 93012 CGGTCACGGTCTTGACGAAGATCTG 93036 Score = 91.5 bits (100), Expect = 3e-13 Identities = 116/159 (73%), Gaps = 3/159 (2%) Strand=Plus/Plus Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 ||| || ||||| ||||| | |||||| ||||| ||||||| || | || || ||||| Sbjct 93995 ATCGTCAAGCTGTTTGCCAGAGAAGATGAGGCGCTGTTGGTTGGGGGCGACACCCTCCTT 94054 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 |||||||||| | ||||| | |||||||||| || || |||||||| ||||| Sbjct 94055 GTCCTGGATCATCGCCTTCACATCTTCGATGGTGGTTGACGCCTCCACCTCGAGCGTGAT 94114 Query 211079 CGTCTTTC---CCGTGAGAGTCTTTACAAACACCTGCAT 211114 | ||| | |||| | |||| ||||| | |||||| Sbjct 94115 GGCCTTGCCGGCCGTCGGGTTCTTCACAAATATCTGCAT 94153 Score = 84.2 bits (92), Expect = 5e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070 || ||||||||||||||||| || ||||| || ||||| || ||| || |||||| Sbjct 98542 CCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCAATGGTATCCGAGGACTCGACCTCG 98601 Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| ||||| || ||||| ||||| || || | |||||| Sbjct 98602 AGCGTGATGGTCTTGCCGGTGAGGGTCTTCACGAAGATCTGCAT 98645 >seq318 Length=85141 Score = 93.3 bits (102), Expect = 1e-13 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070 || |||||||| |||||||| || || || ||||||||||| ||| ||||||||| Sbjct 71838 CCCTCCTTGTCTTGGATCTTGGCCTTGACATTGTCGATGGTGTCCGAGGACTCAACCTCG 71897 Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| || || |||||||| |||||||| || | |||||| Sbjct 71898 AGGGTGATGGTTTTGCCCGTGAGGGTCTTTACGAAAATCTGCAT 71941 Score = 87.8 bits (96), Expect = 4e-12 Identities = 83/106 (78%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || ||||| ||||| ||||| || |||||||| || || ||||| | ||||| Sbjct 71671 AGCACCAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGGCCATCC 71730 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAA 211008 || ||||||||||| |||||||| ||||| || ||||| || |||| Sbjct 71731 TCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCGGGGGGAA 71776 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159126291819815