Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20pubescens_20[genbank_20GCA_5F001895945.1_202016-12-09] 1,731 sequences; 39,739,821 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq590 100 2e-16 >seq590 Length=36723 Score = 100 bits (110), Expect = 2e-16 Identities = 127/175 (73%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 30017 AAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAG 30076 || |||| ||||||||| ||||| || || || ||||| ||| | || ||| | | | Sbjct 25576 AAGTGCCGCCACTGGAAGCCGTAGACGGGCCCGAGGTCGCCCGCGCGCCGGTGGCCCAGG 25635 Query 30077 CCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCG 30136 || | ||| || | || || |||| ||||| ||||||||||||| | ||||| || Sbjct 25636 CCGCGCTTCTCGAGGAACTCCTTGGAGCCGTTACCGTCCCAGATCTTGATGCCCTTGGCG 25695 Query 30137 GAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGA 30191 ||||||| |||||| ||| | ||| |||||||| || | |||||| |||| Sbjct 25696 GAGAGCTGCGTGGAGTCGGTGCAGCCTTGAACGAACCAGAGTAACTCCTCGACGA 25750 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406154631352666