Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20pubescens_20[genbank_20GCA_5F001895945.1_202016-12-09] 1,731 sequences; 39,739,821 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq590 116 3e-21 >seq590 Length=36723 Score = 116 bits (128), Expect = 3e-21 Identities = 205/296 (69%), Gaps = 2/296 (1%) Strand=Plus/Plus Query 27022 GGATGAGGGTCGTAACCCTCCAGGGAGAAATCCTCTGCCTTAAAGTCGTCCAGGCTCTCC 27081 || || |||||||||||||||| | ||| ||||| | ||||| || | || || Sbjct 25004 GGGTGGGGGTCGTAACCCTCCACGATGAAGTCCTCGCTCCGGAAGTCATCGATGCCCTTG 25063 Query 27082 ACCCT-CCTGTTTATCCTCAGTGTGGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAGTCTT 27140 || | | | || | ||| |||| || || || ||||| | ||||||||| || || Sbjct 25064 ACTTTGCGCGCCCAT-CGCAGCTTGGGGAATGGCCTTGGCTCGCGCTCGAGCTGCGTTTT 25122 Query 27141 CAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTGGACAAACTCTCC 27200 |||| || ||||| || |||||||||| |||||||| || | || | ||| Sbjct 25123 GAGCGCGTCGACGTGGTCGCGGTAGACGTGCGCGTCTCCGAGCTGGATGATCAGCTCGTG 25182 Query 27201 CGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTT 27260 ||| | |||||||||| || | ||||| ||||||||| | |||| || ||||| Sbjct 25183 CGGGACGGTATCGGTGACGTGCGCGACCATGTGCGTGAGGAGGGCGTAGGACGCAATGTT 25242 Query 27261 AAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCT 27316 ||||| | |||||||||| ||| | || | |||||| | | || ||||||| Sbjct 25243 GAAGGGGATTCCGAGCCCCAGGTCGGCGGAGCGCTGGTACATCAAGCAGGAGAGCT 25298 Score = 102 bits (112), Expect = 6e-17 Identities = 206/303 (68%), Gaps = 2/303 (1%) Strand=Plus/Plus Query 27384 GGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCAC 27443 ||||||||| ||| | | ||||||||| | ||| |||| || | | || | | Sbjct 25449 GGGGTTCCACGCGGAGAGGATGATGCGGCGGTCGGTGGGGTCGTGCTTTATCTTGCGAAT 25508 Query 27444 GGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTCTACC-CTCATGTCCGTGTACT 27502 | | || ||||| || || ||| | |||| ||| || | | || |||| ||| Sbjct 25509 GCACTCCTGGAGCTGGTCAACGCCCTTGCCCGTGTATTCCGCGTCGCA-GTCCTCATACG 25567 Query 27503 CTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGT 27562 || || || |||| ||| ||||| ||||| || || || ||||| ||| | || || Sbjct 25568 AGGCGCCAAAGTGCCGCCACTGGAAGCCGTAGACGGGCCCGAGGTCGCCCGCGCGCCGGT 25627 Query 27563 GCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCC 27622 | | | ||| | ||| || | || || |||| ||||| ||||||||||||| | | Sbjct 25628 GGCCCAGGCCGCGCTTCTCGAGGAACTCCTTGGAGCCGTTACCGTCCCAGATCTTGATGC 25687 Query 27623 CCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCA 27682 |||| ||||||||| |||||| ||| | ||| |||||||| || | |||||| | Sbjct 25688 CCTTGGCGGAGAGCTGCGTGGAGTCGGTGCAGCCTTGAACGAACCAGAGTAACTCCTCGA 25747 Query 27683 CGA 27685 ||| Sbjct 25748 CGA 25750 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369499404668261