Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20pubescens_20[genbank_20GCA_5F001895945.1_202016-12-09] 1,731 sequences; 39,739,821 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq1532 86.0 9e-12 >seq1532 Length=168184 Score = 86.0 bits (94), Expect = 9e-12 Identities = 137/196 (70%), Gaps = 3/196 (2%) Strand=Plus/Minus Query 48183 TCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAGCCAAAATATTGCCGCG 48242 ||||| || || ||||| || ||||| | ||||| || |||||||| || || | ||| Sbjct 155452 TCGTTGGAGAAGGTGAGCCCAGGCATCAAGCCACGCTTCTTGAGCCAGAAGATGGAGGCG 155393 Query 48243 AAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGTAAGTCTCTCTCCGTAA 48302 ||||| || || ||||| ||||| || || || || || || | || | ||| | | Sbjct 155392 AAAGAGCCGGAGAAGAAGATGCCCTCGACAGCGGCGAAGGCAATGAGACGCTCAGAGAAC 155333 Query 48303 CTGGCTTCGTTGTGT---ATCCACCGTTGTGCCCAATCAGCCTTCTTCTTTACACAAGGC 48359 | || |||| ||||| || | ||||| || ||||||||||| | ||||| Sbjct 155332 GCAGACTCCTTGTCGGAGATCCAGCGCAGGGCCCAGTCGGCCTTCTTCTTGATGCAAGGA 155273 Query 48360 ATTGTTTCTATAGCAT 48375 || || || ||||||| Sbjct 155272 ATGGTATCGATAGCAT 155257 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694653769103840