Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20pubescens_20[genbank_20GCA_5F001895945.1_202016-12-09] 1,731 sequences; 39,739,821 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq1532 102 1e-16 >seq1532 Length=168184 Score = 102 bits (112), Expect = 1e-16 Identities = 145/199 (73%), Gaps = 9/199 (5%) Strand=Plus/Minus Query 46672 TCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCG 46731 ||||| || || |||||||||||||| | |||||||| |||||||| || || | ||| Sbjct 155452 TCGTTGGAGAAGGTGAGCCCAGGCATCAAGCCACGCTTCTTGAGCCAGAAGATGGAGGCG 155393 Query 46732 AAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAA 46791 ||||| || || ||||| ||||| || ||||| ||||| || | || | ||| | || Sbjct 155392 AAAGAGCCGGAGAAGAAGATGCCCTCGACAGCGGCGAAGGCAATGAGACGCTCAGAG-AA 155334 Query 46792 CTGGCA---TCATTAT--GA-ATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAA 46845 | ||| || || | || ||||| | | ||||| || ||||| ||||| | ||| Sbjct 155333 C--GCAGACTCCTTGTCGGAGATCCAGCGCAGGGCCCAGTCGGCCTTCTTCTTGATGCAA 155276 Query 46846 GGCATTGTTTCTATAGCAT 46864 || || || || ||||||| Sbjct 155275 GGAATGGTATCGATAGCAT 155257 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712918973881920