Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20sp._20AH28-2_20[genbank_20GCA_5F001304625.1_202015-09-30] 306 sequences; 38,904,488 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq2 87.8 4e-12 >seq2 Length=1603695 Score = 87.8 bits (96), Expect = 4e-12 Identities = 168/248 (68%), Gaps = 0/248 (0%) Strand=Plus/Minus Query 94774 TGAAAGTGGATGCCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTA 94833 |||| || |||||||| || ||||| |||||| ||| || || ||||| || || Sbjct 1471730 TGAATGTTGATGCCGATCCCACCAGCCGTCTTGCTGATCATCGCGCAGTCCTTTAGCGTC 1471671 Query 94834 TCATAAATACCCTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGG 94893 || |||||||| || ||||| | | | || | |||||| ||| || || Sbjct 1471670 GAGTAGATACCCTCGATAGAGTCATCCTTCATGGACACCAAGAAGCATGAGCTGAGCTGC 1471611 Query 94894 GGTGTGACTGTTCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGAC 94953 || || ||||| ||| ||||| || || || ||||| || || || || ||| Sbjct 1471610 GGGTTGGGGGTTCCGGCATTGAACAGGGTTGGCGACGCATGTGTGAAGTATCGCTCGGAC 1471551 Query 94954 ATGAGATCATATGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACA 95013 ||||| | || || ||||| | | ||| ||| |||||| ||||| ||||||||| Sbjct 1471550 ATGAGGTGGTAAGTCTCAATTGCGCGGTCGATATCTTCTCCGTGGATGCCAACAGCCACA 1471491 Query 95014 CGCATAAT 95021 ||||| || Sbjct 1471490 CGCATGAT 1471483 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989580120212230