Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20sp._20AH28-2_20[genbank_20GCA_5F001304625.1_202015-09-30] 306 sequences; 38,904,488 total letters Query= NC_003529.1 Length=155060 Score E Sequences producing significant alignments: (Bits) Value seq8 104 2e-17 >seq8 Length=958091 Score = 104 bits (114), Expect = 2e-17 Identities = 158/225 (70%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 52837 GAGGCCGTCGACATTGAAAAAGAGTTTTTTACGGACGCTTTACCCGTATCATTGTTGGGC 52896 ||||||||||| || || || ||||| | ||||| || | || || || | | ||| Sbjct 467127 GAGGCCGTCGAGATCGAGAAGGAGTTCCTCACGGAGGCGCTCCCGGTCTCGCTCATCGGC 467068 Query 52897 ATGAACGCGACCATGATGTGCGAGTACATCGAGTTTGTTGCGGACAGACTGTTGATGCAG 52956 ||||||||| |||||||| ||||||||||||| || |||||| | ||| | | | Sbjct 467067 ATGAACGCGCGGCTGATGTGCCAGTACATCGAGTTCGTCGCGGACCGCCTGCTCGTCGCG 467008 Query 52957 CTCGGTCAGCCGAAATACTATAATGCGCGTAACCCCTTTTCGTTTATGAACAACATATCG 53016 ||||| | ||| |||| ||| ||||| ||| || ||| ||| || ||| Sbjct 467007 CTCGGGAACGAGAAGCACTACCGCGCGGCGAACCCGTTTGACTTCATGGACATGATCTCG 466948 Query 53017 CTCGAGGGCAAAACAAACTTTTTCGAGAGACGTGTGGGCGAGTAC 53061 ||| ||||| || ||||| ||||||| || ||| ||||||| Sbjct 466947 CTCACCGGCAAGACGAACTTCTTCGAGAAGCGCGTGTCCGAGTAC 466903 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496062102555200