Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20sp._20AH28-2_20[genbank_20GCA_5F001304625.1_202015-09-30] 306 sequences; 38,904,488 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq8 107 3e-18 >seq8 Length=958091 Score = 107 bits (118), Expect = 3e-18 Identities = 172/245 (70%), Gaps = 3/245 (1%) Strand=Plus/Plus Query 49960 CATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGT 50019 || ||||| ||| |||| |||||||| | || || |||||||| |||||||| Sbjct 467189 CACGCGAAGTCGGTATGCATGCCCTCGTCGCGGGAGATGAGCTCGTTGGAGAACGTGAGG 467248 Query 50020 CCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAG 50079 |||||||| || || ||||| || ||||| || |||| || || || || || |||||| Sbjct 467249 CCGGGCATGAGCCCGCGCTTCTTGAGCCAGAAGATGGCGGCGAACGAGCCGGAGAAGAAG 467308 Query 50080 ATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGG--CGCT-GTCATGT 50136 | || || || ||||| || || || || | ||| || || | |||| ||| Sbjct 467309 ACGCCCTCGACGGCGGCGAACGCGACGAGCCGCTCCGCAAAAGCAGAACGCTCGTCCGCG 467368 Query 50137 ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTA 50196 |||||| | ||||| ||||||||||| || | || || || || || ||||| | Sbjct 467369 ATCCACCGGAGGGCCCAGTCGGCCTTCTTCTTGATGCAGGGTATGGTGTCGATGGCGTCG 467428 Query 50197 AAGAG 50201 ||||| Sbjct 467429 AAGAG 467433 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718266052621840