Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20sp._20AH28-2_20[genbank_20GCA_5F001304625.1_202015-09-30] 306 sequences; 38,904,488 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq2 87.8 5e-12 >seq2 Length=1603695 Score = 87.8 bits (96), Expect = 5e-12 Identities = 146/211 (69%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 363754 GGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACAATACTGCGAGGTACGTC 363813 || ||||| || || | ||||||||||| ||||| | ||| || || | |||||| Sbjct 1471829 GGCTACTCCAACGGAATCGTTCCCATGCTCCGTGTTTACGACGCGACAGCCCGTTACGTC 1471888 Query 363814 GACCAGGGTGGAGGAAAGCGCAAAGGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCC 363873 || |||||||| ||||| || ||||| || || || | ||||| || ||| Sbjct 1471889 GATCAGGGTGGTAACAAGCGGCCTGGAGCGTTCGCCATCTACTTGGAGCCCTGGCACGCC 1471948 Query 363874 GATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGT 363933 ||| | || || || | || ||||| || ||| || || ||||| | || || ||| Sbjct 1471949 GATGTGTTCGAATTCATCGACCTCCGCAAGAACCACGGCAAGGAGGAGGTCCGCGCTCGT 1472008 Query 363934 GATCTGTTCTATGCACTTTGGGTTTCTGACC 363964 ||||| ||||| || || ||||| | |||| Sbjct 1472009 GATCTTTTCTACGCCCTCTGGGTACCCGACC 1472039 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303348490039292