Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20sp._20AH28-2_20[genbank_20GCA_5F001304625.1_202015-09-30] 306 sequences; 38,904,488 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq8 179 3e-40 seq4 134 1e-26 seq29 118 1e-21 seq13 95.1 1e-14 seq9 95.1 1e-14 >seq8 Length=958091 Score = 179 bits (198), Expect = 3e-40 Identities = 316/453 (70%), Gaps = 7/453 (2%) Strand=Plus/Minus Query 46145 CTTTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTT 46204 |||| || ||||| | || || || || || ||||||||||| || || ||| | Sbjct 467351 CTTTTGCGGAGCGGCTCGTCGCGTTCGCCGCCGTCGAGGGCGTCTTCTTCTCCGGCTCGT 467292 Query 46205 TTGCCGCCATCTTTTACATCAA-AACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAAC 46263 | ||||||||||| | |||| || | |||| ||||||||||||| ||||| |||| Sbjct 467291 TCGCCGCCATCTTCTGGCTCAAGAAGCGCGGGC-TCATGCCCGGCCTCACGTTCTCCAAC 467233 Query 46264 GAGCTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTCTCTACTATAACACT 46323 ||||| || || |||||||||||| ||||||| ||||| ||||| ||| || | ||| Sbjct 467232 GAGCTCATCTCCCGCGACGAGGGCATGCATACCGACTTCGCGTGCCTC--CTCTTCCAC- 467176 Query 46324 CGCGTGC-ACGACAAGCTTGCGCCCGACACCGTGCTGAGCATGTTCAAGGAGGCGGTGGC 46382 | | | | || | | | |||| | |||||| |||| || ||||| || | Sbjct 467175 CACCTCCGCCGGCGGCCGCACCCCCG-CCGCGTGCTCCGCATCGTCGCCGAGGCCGTCGA 467117 Query 46383 CATTGAGAAGGAGTTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGAACGCACA 46442 || ||||||||||| | |||| || || || | | || | ||||||||||| | Sbjct 467116 GATCGAGAAGGAGTTCCTCACGGAGGCGCTCCCGGTCTCGCTCATCGGCATGAACGCGCG 467057 Query 46443 GTCAATGTGCGACTACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCTTCACCAGCC 46502 | |||||| | ||||||||||| || |||||||| |||||||| ||| | Sbjct 467056 GCTGATGTGCCAGTACATCGAGTTCGTCGCGGACCGCCTGCTCGTCGCGCTCGGGAACGA 466997 Query 46503 GAAGCATTTTCACGCGCGCAATCCATTTGAGTTTATGAACAACATCTCCCTGGAGGGCAA 46562 |||||| | | |||| || || ||||| || ||| ||| ||||| || ||||| Sbjct 466996 GAAGCACTACCGCGCGGCGAACCCGTTTGACTTCATGGACATGATCTCGCTCACCGGCAA 466937 Query 46563 AACTAATTTTTTCGAAAAGCGCGTCGGCGAGTA 46595 || || || ||||| |||||||| |||||| Sbjct 466936 GACGAACTTCTTCGAGAAGCGCGTGTCCGAGTA 466904 Score = 98.7 bits (108), Expect = 9e-16 Identities = 119/162 (73%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 46147 TTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTTTT 46206 |||||||||||| | | ||||| || ||||||||| |||| || ||||| || Sbjct 469513 TTCGCCGAGCGTCTCATCGCCTTCGCCGCTGTGGAGGGTATCTTCTTCTCTGGATCCTTC 469572 Query 46207 GCCGCCATCTTTTACATCAAAACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACGAG 46266 ||| ||||||| | |||| | ||| | ||||| ||||| ||||| ||||||| Sbjct 469573 GCCTCCATCTTCTGGCTCAAGAAGCGTGGCTTGATGCCTGGCCTCACGTTCTCCAACGAG 469632 Query 46267 CTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGT 46308 || || || ||||| |||||| |||| || ||||| |||||| Sbjct 469633 CTCATCTCCCGCGATGAGGGCATGCACACCGACTTCGCGTGT 469674 >seq4 Length=1487122 Score = 134 bits (148), Expect = 1e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||||| ||| || || || || | || |||||||| ||||||||||| || | Sbjct 23553 CCACCGCGCAGACGAAGGACCAAGTGAAGCGTGGACTCCTTCTGAATGTTGTAGTCCGAC 23612 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || |||||| | ||||||||| ||| |||| || ||||||||||| |||||| Sbjct 23613 AGAGTACGTCCGTCCTCCAACTGCTTGCCGGCGAAGATCAAGCGCTGCTGGTCAGGAGGG 23672 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| ||| ||||| | || | || |||| ||||||| Sbjct 23673 ATACCCTCCTTGTCTTGGATCTTCGCCTTGACGTTGTCGATCGTGTCGGAAGACTCGACC 23732 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | ||| | ||| || || || || || || ||||| || ||||| Sbjct 23733 TCCAAGGTGATGGTCTTGCCCGTGAGCGTCTTGACGAAGATTTGCAT 23779 Score = 114 bits (126), Expect = 1e-20 Identities = 155/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 131020 CGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAG 131079 ||||| || | ||| | ||| |||||||| || |||||||| || || ||||| Sbjct 24074 CGCAGAACGAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCTGACAACGTGCGACCA 24133 Query 131080 TCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTG 131139 ||||| ||||||||||| ||| |||| | |||||||||||| || ||||| || || ||| Sbjct 24134 TCCTCGAGCTGCTTGCCGGCGAAGATAAGACGCTGCTGGTCGGGCGGGATGCCCTCCTTG 24193 Query 131140 TCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACG 131199 || ||| ||| ||| | | || | || || | ||||| | |||| ||| | Sbjct 24194 TCCTGGATCTTCGCCTTAACATTGTCGATGGTGTCCGACGACTCAACCTCGAGGGTGATC 24253 Query 131200 GTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || || || || || || || ||||| ||||||||| Sbjct 24254 GTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCATG 24289 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 131038 GTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCT 131097 ||||||||||| || |||||||| ||| | ||||| |||||| | |||||| || Sbjct 23355 GTCGACTCCTTCTGGATGTTGTAGTCGGAGAGCGTGCGGCCGTCCTCCAACTGCTTCCCA 23414 Query 131098 GCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTG 131157 ||| |||| | ||| ||||||||||| || || || || ||||| ||| ||| ||| Sbjct 23415 GCGAAGATAAGACGTTGCTGGTCCGGGGGAATCCCCTCCTTGTCCTGGATCTTCGCCTTC 23474 Query 131158 AGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTT 131217 | | || | || || | |||||| | || | |||| ||| || || || || || Sbjct 23475 ACGTTGTCGATCGTGTCCGAGGACTCAACCTCCAGCGTAATGGTCTTCCCTGTGAGCGTC 23534 Query 131218 TTTACGAAAATCTGCAT 131234 || ||||| |||||||| Sbjct 23535 TTGACGAAGATCTGCAT 23551 Score = 96.9 bits (106), Expect = 3e-15 Identities = 140/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 131037 GGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCC 131096 ||| |||||||| || |||||||| || || ||||| ||||| ||||||||||| Sbjct 23863 GGTAGACTCCTTCTGGATGTTGTAGTCCGACAACGTGCGACCATCCTCCAGCTGCTTGCC 23922 Query 131097 TGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTT 131156 ||| |||| | |||||||||||| || |||||||| || || || || || ||| Sbjct 23923 GGCGAAGATAAGACGCTGCTGGTCTGGCGGGATTCCCTCCTTATCCTGAATCTTGGCCTT 23982 Query 131157 GAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGT 131216 || | || | || || | ||||||| || | || | || || ||||| | || Sbjct 23983 GACGTTGTCGATGGTGTCAGAAGACTCGACCTCCAGCGTGATCGTCTTGCCGGTCAACGT 24042 Query 131217 TTTTACGAAAATCTGCAT 131234 || ||||| |||||||| Sbjct 24043 CTTCACGAAGATCTGCAT 24060 Score = 87.8 bits (96), Expect = 2e-12 Identities = 93/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| || || | ||| || || | || | ||| |||||||| || |||||||| || Sbjct 24289 GCCGCCACGGAGACGGAGGACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCAGA 24348 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || ||||| |||||| ||||||||||| ||| |||| | ||||||||||| ||||| Sbjct 24349 CAGCGTGCGGCCGTCCTCGAGCTGCTTGCCCGCGAAGATCAGGCGCTGCTGGTCGGGAGG 24408 Query 131127 GAT 131129 ||| Sbjct 24409 GAT 24411 >seq29 Length=419596 Score = 118 bits (130), Expect = 1e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| ||||| | ||| || || | || | |||||||||||| || |||||||| || Sbjct 160979 GCCTCCGCGAAGACGAAGAACGAGGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGA 160920 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | ||||| ||||| ||||||||||||||| | || || ||||||||||| || || Sbjct 160919 AAGAGTGCGGCCATCCTCGAGCTGCTTGCCTGCGAAAATCAAGCGCTGCTGGTCGGGCGG 160860 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || || || ||||| || ||| ||||| | || | || |||| ||||||| Sbjct 160859 AATGCCCTCCTTGTCTTGAATCTTCGCCTTGACGTTGTCGATGGTGTCGGACGACTCGAC 160800 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| ||| | ||| || ||||| | || || || || |||||||| Sbjct 160799 CTCGAGGGTGATGGTCTTGCCGGTCAAGGTCTTGACAAAGATCTGCAT 160752 Score = 102 bits (112), Expect = 8e-17 Identities = 161/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 |||||||| | ||| || || | || | ||| |||||| || |||||||| || Sbjct 161206 CCACCGCGGAGACGAAGGACGAGGTGAAGGGTGCTCTCCTTCTGGATGTTGTAGTCCGAG 161147 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || |||||| ||||||||||| ||| |||| | ||||||||||| || ||| Sbjct 161146 AGCGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCGGGCGGG 161087 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 || || || ||||| ||| ||| ||| | | || | || || | ||||||| Sbjct 161086 ATACCCTCCTTGTCCTGGATCTTCGCCTTCACATTATCGATCGTGTCCGAAGACTCGACC 161027 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGACT 131238 || | || | || || ||||| || || || ||||| ||||||||| || Sbjct 161026 TCCAACGTGATCGTCTTGCCGGTGAGCGTCTTGACGAAGATCTGCATGCCT 160976 Score = 91.5 bits (100), Expect = 1e-13 Identities = 76/93 (82%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 131037 GGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCC 131096 ||| |||||||| ||||||||||| || | ||||||| |||||| |||||||| || Sbjct 160668 GGTGGACTCCTTCTGAATGTTGTAGTCAGAGAGGGTGCGCCCGTCCTCGAGCTGCTTCCC 160609 Query 131097 TGCGTAGATTAAACGCTGCTGGTCCGGAGGGAT 131129 ||| |||| | |||||||||||| |||||||| Sbjct 160608 GGCGAAGATGAGACGCTGCTGGTCGGGAGGGAT 160576 >seq13 Length=709687 Score = 95.1 bits (104), Expect = 1e-14 Identities = 87/110 (79%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 131020 CGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAG 131079 || ||||| | || | ||| |||||||| || |||||||| ||||| | ||| || | Sbjct 147985 CGGAGCACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTGAGGGTACGGCCG 148044 Query 131080 TCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGAT 131129 ||||| ||||||||||| ||| |||| | |||||||||||| || ||||| Sbjct 148045 TCCTCGAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCGGGGGGGAT 148094 >seq9 Length=891578 Score = 95.1 bits (104), Expect = 1e-14 Identities = 94/122 (77%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| || | || ||||| | || | ||| |||||||| || |||||||| ||||| Sbjct 319925 CCACCACGAAGGCGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGCTG 319866 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| ||||| ||||||||||| ||| |||| | ||||||||||| || ||| Sbjct 319865 AGGGTGCGGCCATCCTCGAGCTGCTTGCCCGCGAAGATCAGGCGCTGCTGGTCGGGGGGG 319806 Query 131128 AT 131129 || Sbjct 319805 AT 319804 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472010994551040