Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trametes_20sp._20AH28-2_20[genbank_20GCA_5F001304625.1_202015-09-30] 306 sequences; 38,904,488 total letters Query= NC_008187.1 Length=191100 Score E Sequences producing significant alignments: (Bits) Value seq4 107 2e-18 >seq4 Length=1487122 Score = 107 bits (118), Expect = 2e-18 Identities = 113/149 (76%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 15050 CCCGAGATTGGCGACAAGTTTTGCTCTGGTATGGCGCAAAAGGGCACGTGCGGCATGATT 15109 ||| |||| ||||||||||| ||| || | || ||||| || || || | Sbjct 1294048 CCCCAGATCGGCGACAAGTTCGCCTCGCGTCACGGTCAGAAGGGTACCATTGGTATCACC 1294107 Query 15110 TTCCCCCAGGAAGACATGCCCTTTACCGCGTCAGGCATGACGCCCGACATTATCATCAAC 15169 | || |||||| |||||||| || |||||| ||||| ||||||||||| ||||||||| Sbjct 1294108 TACCGCCAGGAGGACATGCCGTTCACCGCGGAGGGCATCACGCCCGACATCATCATCAAC 1294167 Query 15170 CCCAACTGCATCCCGTCCCGCATGACCAT 15198 ||| || |||||||||||| |||||||| Sbjct 1294168 CCCCACGCCATCCCGTCCCGTATGACCAT 1294196 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 611389661425600